RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 CAMK2AQ9UQM7 478 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 DLGAP4Q9Y2H0 992 aa20.79■□□□□ 0.92
PTPN4-207ENST00000460162 PRAMEF25A6NGN4 478 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 CD8B2A6NJW9 211 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 UGT2B11O75310 529 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 IL2RAP01589 272 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 CHN1P15882 459 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 BMP7P18075 431 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 BMP5P22003 454 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 TIA1P31483 386 aaKnown RBP eCLIP20.78■□□□□ 0.92
PTPN4-207ENST00000460162 GCKP35557 465 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 PTGDSP41222 190 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 GSTM5P46439 218 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 RAE1P78406 368 aaKnown RBP20.78■□□□□ 0.92
PTPN4-207ENST00000460162 HEPACAMQ14CZ8 416 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 FBXL19-AS1Q494R0 122 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 EIPR1Q53HC9 387 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 WIPI1Q5MNZ9 446 aaPredicted RBP20.78■□□□□ 0.92
PTPN4-207ENST00000460162 GALNT18Q6P9A2 607 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 FAM83FQ8NEG4 500 aaPredicted RBP20.78■□□□□ 0.92
PTPN4-207ENST00000460162 KIF18AQ8NI77 898 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 SH3GL2Q99962 352 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 EHD3Q9NZN3 535 aa20.78■□□□□ 0.92
PTPN4-207ENST00000460162 GPR55Q9Y2T6 319 aaPredicted RBP20.78■□□□□ 0.92
PTPN4-207ENST00000460162 KIAA1549Q9HCM3 1950 aa20.77■□□□□ 0.92
PTPN4-207ENST00000460162 DOCK7Q96N67 2140 aa20.77■□□□□ 0.92
PTPN4-207ENST00000460162 OR6C70A6NIJ9 312 aa20.77■□□□□ 0.92
PTPN4-207ENST00000460162 ABCB7O75027 752 aa20.77■□□□□ 0.92
PTPN4-207ENST00000460162 ICOSLGO75144 302 aa20.77■□□□□ 0.92
PTPN4-207ENST00000460162 ACTL6AO96019 429 aa20.77■□□□□ 0.92
PTPN4-207ENST00000460162 CEBPEQ15744 281 aa20.77■□□□□ 0.92
PTPN4-207ENST00000460162 ERCC6LQ2NKX8 1250 aa20.77■□□□□ 0.92
PTPN4-207ENST00000460162 DCST1Q5T197 706 aa20.77■□□□□ 0.92
PTPN4-207ENST00000460162 OR9A2Q8NGT5 310 aa20.77■□□□□ 0.92
PTPN4-207ENST00000460162 ABTB1Q969K4 478 aaPredicted RBP20.77■□□□□ 0.92
PTPN4-207ENST00000460162 CCDC126Q96EE4 140 aa20.77■□□□□ 0.92
PTPN4-207ENST00000460162 C11orf24Q96F05 449 aaPredicted RBP20.77■□□□□ 0.92
PTPN4-207ENST00000460162 SLC35A4Q96G79 324 aa20.77■□□□□ 0.92
PTPN4-207ENST00000460162 WDYHV1Q96HA8 205 aa20.77■□□□□ 0.92
PTPN4-207ENST00000460162 GALNT9Q9HCQ5 603 aa20.77■□□□□ 0.92
PTPN4-207ENST00000460162 FOXD3Q9UJU5 478 aaPredicted RBP20.77■□□□□ 0.92
PTPN4-207ENST00000460162 SERTM1A2A2V5 107 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 MBD3L4A6NDZ8 208 aaPredicted RBP20.76■□□□□ 0.91
PTPN4-207ENST00000460162 MBD3L3A6NE82 208 aaPredicted RBP20.76■□□□□ 0.91
PTPN4-207ENST00000460162 MBD3L5A6NJ08 208 aaPredicted RBP20.76■□□□□ 0.91
PTPN4-207ENST00000460162 KDM4EB2RXH2 506 aaPredicted RBP20.76■□□□□ 0.91
PTPN4-207ENST00000460162 GOLGA8RI6L899 631 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 SYT5O00445 386 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 UQCRC1P31930 480 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 KIR2DL3P43628 341 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 WNT3P56703 355 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 HMGCS1Q01581 520 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 DESI1Q6ICB0 168 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 CCDC116Q8IYX3 515 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 MBD3L2Q8NHZ7 208 aaPredicted RBP20.76■□□□□ 0.91
PTPN4-207ENST00000460162 MZB1Q8WU39 189 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 RNASE6Q93091 150 aaKnown RBP20.76■□□□□ 0.91
PTPN4-207ENST00000460162 EXOSC8Q96B26 276 aaKnown RBP20.76■□□□□ 0.91
PTPN4-207ENST00000460162 TMCO6Q96DC7 493 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 DTNBP1Q96EV8 351 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 APIPQ96GX9 242 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 COL21A1Q96P44 957 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 TXLNGYQ9BZA5 131 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 OR2B2Q9GZK3 357 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 GSTO2Q9H4Y5 243 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 SIRT5Q9NXA8 310 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 MAPRE3Q9UPY8 281 aa20.76■□□□□ 0.91
PTPN4-207ENST00000460162 EXO1Q9UQ84 846 aaKnown RBP20.76■□□□□ 0.91
PTPN4-207ENST00000460162 CBR3O75828 277 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 PYGBP11216 843 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 CD1EP15812 388 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 ZNF136P52737 540 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 NAGLUP54802 743 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 NAA20P61599 178 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 RCAN2Q14206 197 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 SLC29A2Q14542 456 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 POMZP3Q6PJE2 187 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 YRDCQ86U90 279 aaKnown RBP20.75■□□□□ 0.91
PTPN4-207ENST00000460162 ZZZ3Q8IYH5 903 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 FAM9CQ8IZT9 166 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 C16orf78Q8WTQ4 265 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 TMBIM1Q969X1 311 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 VSTM2LQ96N03 204 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 KCNA7Q96RP8 456 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 TRIB1Q96RU8 372 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 SERHLQ9NQF3 203 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 SLC35C2Q9NQQ7 365 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 SENP1Q9P0U3 644 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 DCDC2Q9UHG0 476 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 MED13LQ71F56 2210 aa20.75■□□□□ 0.91
PTPN4-207ENST00000460162 C2CD3Q4AC94 2353 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 H3BQF6 201 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 GLRA3O75311 464 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 ERN1O75460 977 aaKnown RBP20.74■□□□□ 0.91
PTPN4-207ENST00000460162 CTAG2O75638 210 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 CT45A8P0DMV1 189 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 CT45A9P0DMV2 189 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 KRT20P35900 424 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 RIPPLY3P57055 190 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 ZNF763Q0D2J5 394 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms