RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 SEMA4GQ9NTN9 838 aa13.31□□□□□ -0.28
SCFD1-203ENST00000458591 SNX7Q9UNH6 387 aa13.31□□□□□ -0.28
SCFD1-203ENST00000458591 A0A0C4DFX4 3053 aa13.31□□□□□ -0.28
SCFD1-203ENST00000458591 CHD9Q3L8U1 2897 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 C2orf92A0A1B0GVN3 265 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 SLC35F4A4IF30 521 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 IGLON5A6NGN9 336 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 HPGDSO60760 199 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 LIMS3P0CW19 117 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 LIMS4P0CW20 117 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 WASP42768 502 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 EPHA5P54756 1037 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 WNT4P56705 351 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 CLDN2P57739 230 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 REEP5Q00765 189 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 ALDH6A1Q02252 535 aaKnown RBP13.3□□□□□ -0.28
SCFD1-203ENST00000458591 PDZK1Q5T2W1 519 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 PIP5KL1Q5T9C9 394 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 SLC30A6Q6NXT4 461 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 C1orf94Q6P1W5 598 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 SHISA5Q8N114 240 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 RGMAQ96B86 450 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 TRIM43Q96BQ3 446 aaPredicted RBP13.3□□□□□ -0.28
SCFD1-203ENST00000458591 CNRIP1Q96F85 164 aaPredicted RBP13.3□□□□□ -0.28
SCFD1-203ENST00000458591 OSGEPL1Q9H4B0 414 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 MBNL1Q9NR56 388 aaKnown RBP13.3□□□□□ -0.28
SCFD1-203ENST00000458591 MARK1Q9P0L2 795 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 GPR34Q9UPC5 381 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 CHST2Q9Y4C5 530 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 ATG4BQ9Y4P1 393 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 CCDC182A6NF36 153 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 FAM25AB3EWG3 89 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 FAM25CB3EWG5 89 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 FAM25GB3EWG6 89 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 HRO43593 1189 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 LGI1O95970 557 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 CCL5P13501 91 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 CHRNEQ04844 493 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 ZNF791Q3KP31 576 aaPredicted RBP13.3□□□□□ -0.28
SCFD1-203ENST00000458591 NKAIN4Q8IVV8 208 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 C12orf76Q8N812 135 aaPredicted RBP13.3□□□□□ -0.28
SCFD1-203ENST00000458591 SENP5Q96HI0 755 aaPredicted RBP13.3□□□□□ -0.28
SCFD1-203ENST00000458591 MSLNLQ96KJ4 702 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 FERD3LQ96RJ6 166 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 BBS4Q96RK4 519 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 MCOLN1Q9GZU1 580 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 SLA2Q9H6Q3 261 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 TRPV5Q9NQA5 729 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 SLC35C2Q9NQQ7 365 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 REV3LO60673 3130 aa13.3□□□□□ -0.28
SCFD1-203ENST00000458591 A0A0A6YYD5 115 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 A0A1W2PR48 441 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 ZC3H12DA2A288 527 aaKnown RBP13.29□□□□□ -0.28
SCFD1-203ENST00000458591 FAM170BA6NMN3 283 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 PIP5K1CO60331 668 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 IL1AP01583 271 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 YES1P07947 543 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 GNSP15586 552 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 P2RY2P41231 377 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 RAB8AP61006 207 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 BNC1Q01954 994 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 ZNF234Q14588 700 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 MLF2Q15773 248 aaPredicted RBP13.29□□□□□ -0.28
SCFD1-203ENST00000458591 PLK5Q496M5 336 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 SNAP47Q5SQN1 464 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 FAM46CQ5VWP2 391 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 KIAA1161Q6NSJ0 714 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 ANKK1Q8NFD2 765 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 OR4Q3Q8NH05 313 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 GRPEL2Q8TAA5 225 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 SUN3Q8TAQ9 357 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 TRIM63Q969Q1 353 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 OTULINQ96BN8 352 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 RNF170Q96K19 258 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 KCTD7Q96MP8 289 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 INSM2Q96T92 566 aaPredicted RBP13.29□□□□□ -0.28
SCFD1-203ENST00000458591 B3GAT2Q9NPZ5 323 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 WASH6PQ9NQA3 447 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 CLCA3PQ9Y6N3 262 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 KIAA1549LQ6ZVL6 1849 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 CD8B2A6NJW9 211 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 SMLR1H3BR10 107 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 POLR1CO15160 346 aaPredicted RBP13.29□□□□□ -0.28
SCFD1-203ENST00000458591 FCMRO60667 390 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 CD8BP10966 210 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 ACP5P13686 325 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 MYL12AP19105 171 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 FUT1P19526 365 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 BCL6P41182 706 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 AVPR1BP47901 424 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 LTB4RQ15722 352 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 HNRNPA1L2Q32P51 320 aaKnown RBP13.29□□□□□ -0.28
SCFD1-203ENST00000458591 MRPL43Q8N983 215 aaKnown RBP13.29□□□□□ -0.28
SCFD1-203ENST00000458591 FAM181AQ8N9Y4 354 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 TMEM163Q8TC26 289 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 OR8D1Q8WZ84 308 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 SLC7A6Q92536 515 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 KAT2AQ92830 837 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 ART5Q96L15 291 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 TMEM245Q9H330 911 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms