RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ERN1O75460 977 aaKnown RBP21.3■■□□□ 1
CBX3-204ENST00000456948 ATP6AP2O75787 350 aa21.3■■□□□ 1
CBX3-204ENST00000456948 LRATO95237 230 aa21.3■■□□□ 1
CBX3-204ENST00000456948 IFI6P09912 130 aa21.3■■□□□ 1
CBX3-204ENST00000456948 BGNP21810 368 aa21.3■■□□□ 1
CBX3-204ENST00000456948 MASP1P48740 699 aa21.3■■□□□ 1
CBX3-204ENST00000456948 MANFP55145 182 aaKnown RBP21.3■■□□□ 1
CBX3-204ENST00000456948 MAGOHP61326 146 aaKnown RBP21.3■■□□□ 1
CBX3-204ENST00000456948 NNATQ16517 81 aa21.3■■□□□ 1
CBX3-204ENST00000456948 SMU1Q2TAY7 513 aa21.3■■□□□ 1
CBX3-204ENST00000456948 C6orf136Q5SQH8 315 aa21.3■■□□□ 1
CBX3-204ENST00000456948 TMEM107Q6UX40 140 aa21.3■■□□□ 1
CBX3-204ENST00000456948 PRR22Q8IZ63 422 aa21.3■■□□□ 1
CBX3-204ENST00000456948 OR7G2Q8NG99 324 aa21.3■■□□□ 1
CBX3-204ENST00000456948 OR52N2Q8NGI0 321 aa21.3■■□□□ 1
CBX3-204ENST00000456948 OMA1Q96E52 524 aa21.3■■□□□ 1
CBX3-204ENST00000456948 DTNBP1Q96EV8 351 aa21.3■■□□□ 1
CBX3-204ENST00000456948 ZNF597Q96LX8 424 aa21.3■■□□□ 1
CBX3-204ENST00000456948 BTBD9Q96Q07 612 aa21.3■■□□□ 1
CBX3-204ENST00000456948 EXO5Q9H790 373 aa21.3■■□□□ 1
CBX3-204ENST00000456948 METTL7AQ9H8H3 244 aa21.3■■□□□ 1
CBX3-204ENST00000456948 ZDHHC11Q9H8X9 412 aa21.3■■□□□ 1
CBX3-204ENST00000456948 ATAD3AQ9NVI7 634 aa21.3■■□□□ 1
CBX3-204ENST00000456948 QPCTLQ9NXS2 382 aa21.3■■□□□ 1
CBX3-204ENST00000456948 MRTO4Q9UKD2 239 aaKnown RBP21.3■■□□□ 1
CBX3-204ENST00000456948 CNOT11Q9UKZ1 510 aaKnown RBP21.3■■□□□ 1
CBX3-204ENST00000456948 C19orf53Q9UNZ5 99 aaPredicted RBP21.3■■□□□ 1
CBX3-204ENST00000456948 DTX4Q9Y2E6 619 aa21.3■■□□□ 1
CBX3-204ENST00000456948 SPTAN1Q13813 2472 aaKnown RBP21.29■■□□□ 1
CBX3-204ENST00000456948 NINQ8N4C6 2090 aa21.29■■□□□ 1
CBX3-204ENST00000456948 A0A1B0GTH9 108 aa21.29■■□□□ 1
CBX3-204ENST00000456948 TTC36A6NLP5 189 aa21.29■■□□□ 1
CBX3-204ENST00000456948 ITM2AO43736 263 aa21.29■■□□□ 1
CBX3-204ENST00000456948 REM1O75628 298 aa21.29■■□□□ 1
CBX3-204ENST00000456948 PDE9AO76083 593 aa21.29■■□□□ 1
CBX3-204ENST00000456948 ABCB1P08183 1280 aaPredicted RBP21.29■■□□□ 1
CBX3-204ENST00000456948 RNF224P0DH78 156 aa21.29■■□□□ 1
CBX3-204ENST00000456948 FOXO1Q12778 655 aa21.29■■□□□ 1
CBX3-204ENST00000456948 ZNF155Q12901 538 aaPredicted RBP21.29■■□□□ 1
CBX3-204ENST00000456948 DUSP8Q13202 625 aa21.29■■□□□ 1
CBX3-204ENST00000456948 MPP2Q14168 576 aa21.29■■□□□ 1
CBX3-204ENST00000456948 ATG16L1Q676U5 607 aa21.29■■□□□ 1
CBX3-204ENST00000456948 RPTNQ6XPR3 784 aa21.29■■□□□ 1
CBX3-204ENST00000456948 LIX1Q8N485 282 aa21.29■■□□□ 1
CBX3-204ENST00000456948 TMEM251Q8N6I4 163 aa21.29■■□□□ 1
CBX3-204ENST00000456948 GOLGA6L1Q8N7Z2 621 aa21.29■■□□□ 1
CBX3-204ENST00000456948 CEP70Q8NHQ1 597 aa21.29■■□□□ 1
CBX3-204ENST00000456948 ELP4Q96EB1 424 aa21.29■■□□□ 1
CBX3-204ENST00000456948 FOLH1BQ9HBA9 442 aa21.29■■□□□ 1
CBX3-204ENST00000456948 C3orf14Q9HBI5 128 aa21.29■■□□□ 1
CBX3-204ENST00000456948 ACSS1Q9NUB1 689 aaPredicted RBP21.29■■□□□ 1
CBX3-204ENST00000456948 EXO1Q9UQ84 846 aaKnown RBP21.29■■□□□ 1
CBX3-204ENST00000456948 USP9YO00507 2555 aaPredicted RBP21.28■■□□□ 1
CBX3-204ENST00000456948 A0A0G2JMM0 328 aa21.28■■□□□ 1
CBX3-204ENST00000456948 A0A1W2PPB8 328 aa21.28■■□□□ 1
CBX3-204ENST00000456948 A0A1W2PRS3 328 aa21.28■■□□□ 1
CBX3-204ENST00000456948 A1L4Q6 167 aa21.28■■□□□ 1
CBX3-204ENST00000456948 OR14I1A6ND48 311 aa21.28■■□□□ 1
CBX3-204ENST00000456948 OR6C70A6NIJ9 312 aa21.28■■□□□ 1
CBX3-204ENST00000456948 KIR3DP1A8MWS1 328 aa21.28■■□□□ 1
CBX3-204ENST00000456948 PRPS1L1P21108 318 aa21.28■■□□□ 1
CBX3-204ENST00000456948 IL12BP29460 328 aa21.28■■□□□ 1
CBX3-204ENST00000456948 ARRB2P32121 409 aa21.28■■□□□ 1
CBX3-204ENST00000456948 MC3RP41968 323 aa21.28■■□□□ 1
CBX3-204ENST00000456948 MAGEA5P43359 124 aa21.28■■□□□ 1
CBX3-204ENST00000456948 SMSP52788 366 aa21.28■■□□□ 1
CBX3-204ENST00000456948 SNTA1Q13424 505 aa21.28■■□□□ 1
CBX3-204ENST00000456948 EFR3AQ14156 821 aa21.28■■□□□ 1
CBX3-204ENST00000456948 C3AR1Q16581 482 aa21.28■■□□□ 1
CBX3-204ENST00000456948 IL23RQ5VWK5 629 aa21.28■■□□□ 1
CBX3-204ENST00000456948 SLC30A6Q6NXT4 461 aa21.28■■□□□ 1
CBX3-204ENST00000456948 ZNF781Q8N8C0 355 aa21.28■■□□□ 1
CBX3-204ENST00000456948 CLHC1Q8NHS4 586 aa21.28■■□□□ 1
CBX3-204ENST00000456948 VSTM2LQ96N03 204 aa21.28■■□□□ 1
CBX3-204ENST00000456948 COL21A1Q96P44 957 aa21.28■■□□□ 1
CBX3-204ENST00000456948 ANGPTL4Q9BY76 406 aa21.28■■□□□ 1
CBX3-204ENST00000456948 PLSCR2Q9NRY7 297 aa21.28■■□□□ 1
CBX3-204ENST00000456948 PLEKHB1Q9UF11 243 aaPredicted RBP21.28■■□□□ 1
CBX3-204ENST00000456948 UTP20O75691 2785 aaKnown RBP21.28■■□□□ 1
CBX3-204ENST00000456948 SUSD5O60279 629 aa21.27■■□□□ 1
CBX3-204ENST00000456948 WISP2O76076 250 aa21.27■■□□□ 1
CBX3-204ENST00000456948 TPOP07202 933 aa21.27■■□□□ 1
CBX3-204ENST00000456948 PSMD4P55036 377 aaKnown RBP21.27■■□□□ 1
CBX3-204ENST00000456948 HSF1Q00613 529 aa21.27■■□□□ 1
CBX3-204ENST00000456948 EMX2Q04743 252 aa21.27■■□□□ 1
CBX3-204ENST00000456948 HSPB3Q12988 150 aa21.27■■□□□ 1
CBX3-204ENST00000456948 PDCD2Q16342 344 aaPredicted RBP21.27■■□□□ 1
CBX3-204ENST00000456948 CPTPQ5TA50 214 aa21.27■■□□□ 1
CBX3-204ENST00000456948 TMEM81Q6P7N7 255 aa21.27■■□□□ 1
CBX3-204ENST00000456948 SLC44A2Q8IWA5 706 aaPredicted RBP21.27■■□□□ 1
CBX3-204ENST00000456948 OR2L13Q8N349 312 aa21.27■■□□□ 1
CBX3-204ENST00000456948 SIMC1Q8NDZ2 872 aa21.27■■□□□ 1
CBX3-204ENST00000456948 RAB3IL1Q8TBN0 382 aa21.27■■□□□ 1
CBX3-204ENST00000456948 FAM57AQ8TBR7 257 aa21.27■■□□□ 1
CBX3-204ENST00000456948 MGARPQ8TDB4 240 aa21.27■■□□□ 1
CBX3-204ENST00000456948 TMBIM1Q969X1 311 aa21.27■■□□□ 1
CBX3-204ENST00000456948 C3orf30Q96M34 536 aa21.27■■□□□ 1
CBX3-204ENST00000456948 RILPQ96NA2 401 aa21.27■■□□□ 1
CBX3-204ENST00000456948 THAP1Q9NVV9 213 aa21.27■■□□□ 1
CBX3-204ENST00000456948 NOP53Q9NZM5 478 aaKnown RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms