RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 FIS1Q9Y3D6 152 aa19.44■□□□□ 0.7
HMGB3-205ENST00000455596 V9GYY5 206 aaPredicted RBP19.44■□□□□ 0.7
HMGB3-205ENST00000455596 MYO1GB0I1T2 1018 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 NPIPB8E9PQR5 432 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 C19orf84I3L1E1 186 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 TO15178 435 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 PLOD3O60568 738 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 SPAG7O75391 227 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 CHRNB4P30926 498 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 TRPC1P48995 793 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 NCBP2P52298 156 aaKnown RBP eCLIP19.43■□□□□ 0.7
HMGB3-205ENST00000455596 SLC30A6Q6NXT4 461 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 B3GNT6Q6ZMB0 384 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 RNF165Q6ZSG1 346 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 IKBIPQ70UQ0 350 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 BTBD9Q96Q07 612 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 NODALQ96S42 347 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 C1orf109Q9NX04 203 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 TAS2R9Q9NYW1 312 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 TAS2R7Q9NYW3 318 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 SLC17A7Q9P2U7 560 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 PTGDR2Q9Y5Y4 395 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 CRYBG3Q68DQ2 2970 aa19.43■□□□□ 0.7
HMGB3-205ENST00000455596 NPHS1O60500 1241 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 UGT2B11O75310 529 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 ERN1O75460 977 aaKnown RBP19.42■□□□□ 0.7
HMGB3-205ENST00000455596 TRAPPC6AO75865 159 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 SLITRK5O94991 958 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 JUNP05412 331 aaKnown RBP19.42■□□□□ 0.7
HMGB3-205ENST00000455596 NEFHP12036 1026 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 PRF1P14222 555 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 GABRA1P14867 456 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 ELAVL4P26378 380 aaKnown RBP19.42■□□□□ 0.7
HMGB3-205ENST00000455596 NTSP30990 170 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 SNTA1Q13424 505 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 KIAA0040Q15053 153 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 PRSS53Q2L4Q9 553 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 FNDC7Q5VTL7 733 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 KANK2Q63ZY3 851 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 DESI1Q6ICB0 168 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 OR7G2Q8NG99 324 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 OR1J4Q8NGS1 313 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 TCP10LQ8TDR4 215 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 TMBIM1Q969X1 311 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 NTNG2Q96CW9 530 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 VSTM2LQ96N03 204 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 GNRHR2Q96P88 292 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 TTYH2Q9BSA4 534 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 MECRQ9BV79 373 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 OSBPL11Q9BXB4 747 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 UBQLN3Q9H347 655 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 FOLH1BQ9HBA9 442 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 LRTM1Q9HBL6 345 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 ALKBH4Q9NXW9 302 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 KLRF1Q9NZS2 232 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 C15orf41Q9Y2V0 281 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 PCDHGB3Q9Y5G1 929 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 FAM215AQ9Y5M1 114 aa19.42■□□□□ 0.7
HMGB3-205ENST00000455596 OR6C70A6NIJ9 312 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 GNB5O14775 395 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 ABCB7O75027 752 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 COQ9O75208 318 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 REM1O75628 298 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 HPNP05981 417 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 HOXD4P09016 255 aaPredicted RBP19.41■□□□□ 0.7
HMGB3-205ENST00000455596 CT45A8P0DMV1 189 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 CT45A9P0DMV2 189 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 KIR3DL1P43629 444 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 CDK9P50750 372 aaKnown RBP19.41■□□□□ 0.7
HMGB3-205ENST00000455596 PSPHP78330 225 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 TOMM20Q15388 145 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 CT45A2Q5DJT8 189 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 C1orf185Q5T7R7 199 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 RTL6Q6ICC9 239 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 OR10Q1Q8NGQ4 319 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 LILRB4Q8NHJ6 448 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 TMCO6Q96DC7 493 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 COL21A1Q96P44 957 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 EML4Q9HC35 981 aaKnown RBP19.41■□□□□ 0.7
HMGB3-205ENST00000455596 EXO1Q9UQ84 846 aaKnown RBP19.41■□□□□ 0.7
HMGB3-205ENST00000455596 DNAJC15Q9Y5T4 150 aa19.41■□□□□ 0.7
HMGB3-205ENST00000455596 A0A087WV62 115 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 C15orf38-AP3S2A0A0A6YYH1 394 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 ICOSLGO75144 302 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 NME6O75414 186 aaPredicted RBP19.4■□□□□ 0.7
HMGB3-205ENST00000455596 CHRNGP07510 517 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 KRT20P35900 424 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 PTGDSP41222 190 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 CORO7P57737 925 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 TIGD3Q6B0B8 471 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 ANGPTL8Q6UXH0 198 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 Q6ZSR9 355 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 GDF7Q7Z4P5 450 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 MREGQ8N565 214 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 OR2T11Q8NH01 316 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 SLC35A4Q96G79 324 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 EGLN2Q96KS0 407 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 TMEM109Q9BVC6 243 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 TUBB1Q9H4B7 451 aa19.4■□□□□ 0.7
HMGB3-205ENST00000455596 GLIPR2Q9H4G4 154 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms