RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 EIF3BP55884 814 aaKnown RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 WNT3P56703 355 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 EIF3EP60228 445 aaKnown RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 OLR1P78380 273 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 CRYZQ08257 329 aaKnown RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 DMTNQ08495 405 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 TNK1Q13470 666 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 KCNJ11Q14654 390 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 STX1AQ16623 288 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 KLHL38Q2WGJ6 581 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 ZNF791Q3KP31 576 aaPredicted RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 DEFB134Q4QY38 66 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 ODF2Q5BJF6 829 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 ACSBG2Q5FVE4 666 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 NHSL2Q5HYW2 709 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 AARS2Q5JTZ9 985 aaKnown RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 PTRHD1Q6GMV3 140 aaKnown RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 KIAA0930Q6ICG6 404 aaPredicted RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 NIPAL1Q6NVV3 410 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 CYHR1Q6ZMK1 362 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 RTL4Q6ZR62 310 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 DNM1P46Q6ZS02 220 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 FAM47EQ6ZV65 393 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 ABHD13Q7L211 337 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 ADCK2Q7Z695 626 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 AMIGO2Q86SJ2 522 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 LINC00523Q86TU6 105 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 CDKL3Q8IVW4 592 aaPredicted RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 MPP5Q8N3R9 675 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 PPM1NQ8N819 430 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 MFSD9Q8NBP5 474 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 IL17RDQ8NFM7 739 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 ABHD11Q8NFV4 315 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 OR52K1Q8NGK4 314 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 OR8K3Q8NH51 312 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 GSDMBQ8TAX9 411 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 ZCCHC10Q8TBK6 192 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 UTP15Q8TED0 518 aaKnown RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 PAQR8Q8TEZ7 354 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 SKA2Q8WVK7 121 aaPredicted RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 LPGAT1Q92604 370 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 KRT35Q92764 455 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 DPF1Q92782 380 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 NCLNQ969V3 563 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 LRRC45Q96CN5 670 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 IQCDQ96DY2 449 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 CAPZA3Q96KX2 299 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 BPIFA3Q9BQP9 254 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 HEMGNQ9BXL5 484 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 LIN28AQ9H9Z2 209 aaKnown RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 CALHM2Q9HA72 323 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 FAM114A2Q9NRY5 505 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 TREX1Q9NSU2 369 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 SACM1LQ9NTJ5 587 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 LMBRD1Q9NUN5 540 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 KLHL42Q9P2K6 505 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 GALPQ9UBC7 116 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 SH2B3Q9UQQ2 575 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 EIF3LQ9Y262 564 aaKnown RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 TMA7Q9Y2S6 64 aaKnown RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 MED16Q9Y2X0 877 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 MMACHCQ9Y4U1 282 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 IKBKGQ9Y6K9 419 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 SNRNP200O75643 2136 aaKnown RBP3.34□□□□□ -1.87
RBM39-220ENST00000455343 DNAJC13O75165 2243 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 CTAGE15A4D2H0 777 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 ERI2A8K979 691 aaKnown RBP3.34□□□□□ -1.87
RBM39-220ENST00000455343 EEF1E1-BLOC1S5C9J1V9 151 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 H3BMM5 538 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 WWP2O00308 870 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 CASKO14936 926 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 PSMD3O43242 534 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 EEF1E1O43324 174 aaKnown RBP3.34□□□□□ -1.87
RBM39-220ENST00000455343 KCNAB3O43448 404 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 ZBTB14O43829 449 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 NIPSNAP2O75323 286 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 SLC43A1O75387 559 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 RCBTB2O95199 551 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 C1QAP02745 245 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 P04436 131 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 CD1AP06126 327 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 NPPBP16860 134 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 CHRM3P20309 590 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 CRYGSP22914 178 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 PPP2R1BP30154 601 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 SLCO1A2P46721 670 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 AGFG1P52594 562 aaKnown RBP3.34□□□□□ -1.87
RBM39-220ENST00000455343 HSD17B7P56937 341 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 TBPL1P62380 186 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 SKP1P63208 163 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 PRAMEP78395 509 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 RUNX1T1Q06455 604 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 PIGFQ07326 219 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 TBL3Q12788 808 aaKnown RBP3.34□□□□□ -1.87
RBM39-220ENST00000455343 TSTA3Q13630 321 aaPredicted RBP3.34□□□□□ -1.87
RBM39-220ENST00000455343 HLXQ14774 488 aaPredicted RBP3.34□□□□□ -1.87
RBM39-220ENST00000455343 RAB39AQ14964 217 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 IQCB1Q15051 598 aa3.34□□□□□ -1.87
RBM39-220ENST00000455343 SF3B4Q15427 424 aaKnown RBP eCLIP3.34□□□□□ -1.874e-7■■■■■ 57.1
RBM39-220ENST00000455343 MPEG1Q2M385 716 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms