RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 TSEN54Q7Z6J9 526 aaKnown RBP11.27□□□□□ -0.6
SMPD4-213ENST00000454468 ASPGQ86U10 573 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 NRMQ8IXM6 262 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 OR2L5Q8NG80 312 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 OR52E4Q8NGH9 312 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 MS4A6EQ96DS6 147 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 METTL2AQ96IZ6 378 aaKnown RBP11.27□□□□□ -0.6
SMPD4-213ENST00000454468 ASPNQ9BXN1 380 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 SLC6A20Q9NP91 592 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 COMMD3Q9UBI1 195 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 SSR3Q9UNL2 185 aa11.27□□□□□ -0.6
SMPD4-213ENST00000454468 A8MU76 341 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 CHRM4P08173 479 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 MRPL3P09001 348 aaKnown RBP11.27□□□□□ -0.61
SMPD4-213ENST00000454468 PCSK2P16519 638 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 COL9A1P20849 921 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 ALAS2P22557 587 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 CD6P30203 668 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 RGS6P49758 472 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 DUSP2Q05923 314 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 ZNF155Q12901 538 aaPredicted RBP11.27□□□□□ -0.61
SMPD4-213ENST00000454468 SPHARQ15513 63 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 ABHD17CQ6PCB6 329 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 TRIM69Q86WT6 500 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 TTLQ8NG68 377 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 OR52P1PQ8NH57 321 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 HCAR2Q8TDS4 363 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 SLC38A2Q96QD8 506 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 GPR174Q9BXC1 333 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 TMEM38AQ9H6F2 299 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 OR2A25A4D2G3 310 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 H3BSH0 61 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 CLEC3AO75596 197 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 GABARAPO95166 117 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 FHP07954 510 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 CBLP22681 906 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 CSTF2P33240 577 aaKnown RBP eCLIP11.27□□□□□ -0.61
SMPD4-213ENST00000454468 ARHGAP19Q14CB8 494 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 RNASE12Q5GAN4 147 aaKnown RBP11.27□□□□□ -0.61
SMPD4-213ENST00000454468 FAAH2Q6GMR7 532 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 Q6ZSR6 202 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 USP43Q70EL4 1123 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 UBE3DQ7Z6J8 389 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 SHISA5Q8N114 240 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 FAM160A2Q8N612 972 aaPredicted RBP11.27□□□□□ -0.61
SMPD4-213ENST00000454468 GATSQ8NAP1 163 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 FKBP10Q96AY3 582 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 WDR92Q96MX6 357 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 OR7D2Q96RA2 312 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 ITGB1BP2Q9UKP3 347 aa11.27□□□□□ -0.61
SMPD4-213ENST00000454468 LOC105369274A0A096LPK9 316 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 LOC102723532A0A0G2JNH3 316 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 TMCC2O75069 709 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 DNAJB6O75190 326 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 DNAJB5O75953 348 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 GNSP15586 552 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 FUT1P19526 365 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 GRK5P34947 590 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 SLC9A3P48764 834 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 BCAP31P51572 246 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 NKX2-5P52952 324 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 GAB4Q2WGN9 574 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 SYT6Q5T7P8 510 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 SYCE2Q6PIF2 218 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 RNF165Q6ZSG1 346 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 PRSS41Q7RTY9 318 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 LRRC56Q8IYG6 542 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 OR4N4Q8N0Y3 316 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 FAM83FQ8NEG4 500 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 RASSF5Q8WWW0 418 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 RACGAP1Q9H0H5 632 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 RSPH9Q9H1X1 276 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 TCEAL2Q9H3H9 227 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 HCN2Q9UL51 889 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 MGAT4BQ9UQ53 548 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 YARS2Q9Y2Z4 477 aaKnown RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 OR10H1Q9Y4A9 318 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 HSPE1-MOB4S4R3N1 261 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 UNC13CQ8NB66 2214 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 A0A1W2PPV9 198 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 A8MV72 311 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 SGK494L7N484 410 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 CCRL2O00421 344 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 PORP16435 677 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 MMP11P24347 488 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 SSTR4P31391 388 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 MAN2A2P49641 1150 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 STX4Q12846 297 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 ZNF791Q3KP31 576 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 TIMM50Q3ZCQ8 353 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 TRMT12Q53H54 448 aaKnown RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 FIGLAQ6QHK4 219 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 PEX5LQ8IYB4 626 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 IL17RCQ8NAC3 791 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 OR4K14Q8NGD5 310 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 OR51L1Q8NGJ5 315 aa11.26□□□□□ -0.61
SMPD4-213ENST00000454468 C11orf24Q96F05 449 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 LINC00615Q96LM1 132 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-213ENST00000454468 RIPOR3Q96MK2 946 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms