RNA–Protein interactions for RNA: ENST00000454403.1

TUBBP2-201, Transcript of tubulin beta pseudogene 2, humanhuman

BASIC

Gene TUBBP2, Length 411 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP2-201ENST00000454403 PAQR8Q8TEZ7 354 aa9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 SPACA9Q96E40 222 aaPredicted RBP9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 TEX37Q96LM6 180 aa9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 C5orf34Q96MH7 638 aa9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 CCDC115Q96NT0 180 aa9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 SIGLEC12Q96PQ1 595 aa9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 GAL3ST4Q96RP7 486 aa9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 EBF4Q9BQW3 602 aa9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 LMF2Q9BU23 707 aaKnown RBP9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 MFRPQ9BY79 579 aa9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 NXF5Q9H1B4 397 aaKnown RBP9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 LIN28AQ9H9Z2 209 aaKnown RBP9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 FOLH1BQ9HBA9 442 aa9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 SH2D2AQ9NP31 389 aa9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 SIRT3Q9NTG7 399 aaPredicted RBP9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 ERVK-11Q9UQG0 969 aa9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 KLF13Q9Y2Y9 288 aaPredicted RBP9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 CSAG2Q9Y5P2 127 aa9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 COPG1Q9Y678 874 aaKnown RBP9.39□□□□□ -0.91
TUBBP2-201ENST00000454403 NUP214P35658 2090 aaPredicted RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 TNRC6AQ8NDV7 1962 aaKnown RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 FAM234BA2RU67 622 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 OR6C70A6NIJ9 312 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 TP53I11O14683 189 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 ERN1O75460 977 aaKnown RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 PPM1BO75688 479 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 NKX2-2O95096 273 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 CRYABP02511 175 aaKnown RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 KRT16P08779 473 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 CNR1P21554 472 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 ABCD3P28288 659 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 IL12AP29459 219 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 ADSLP30566 484 aaPredicted RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 LCN1P31025 176 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 MAGEA8P43361 318 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 CCT3P49368 545 aaKnown RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 CDK9P50750 372 aaKnown RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 POLR2JP52435 117 aaKnown RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 PNLIPRP2P54317 469 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 STX1BP61266 288 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 HBA1P69905 142 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 RPP38P78345 283 aaKnown RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 MRPS22P82650 360 aaKnown RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 TXNL4AP83876 142 aaKnown RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 PSG6Q00889 435 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 SNTA1Q13424 505 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 ZNHIT3Q15649 155 aaPredicted RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 INPP5JQ15735 1006 aaPredicted RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 MAPKAPK3Q16644 382 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 FAM174BQ3ZCQ3 159 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 SPANXN4Q5MJ08 99 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 TBCELQ5QJ74 424 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 AP1ARQ63HQ0 302 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 SLC22A10Q63ZE4 541 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 TMEM198Q66K66 360 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 OR4F3Q6IEY1 312 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 MDGA2Q7Z553 956 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 SLC34A3Q8N130 599 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 CPSF7Q8N684 471 aaKnown RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 ZFP62Q8NB50 900 aaPredicted RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 FAM98AQ8NCA5 519 aaKnown RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 PSD4Q8NDX1 1056 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 NUP43Q8NFH3 380 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 OR56A1Q8NGH5 318 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 TSPEARQ8WU66 669 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 NTNG2Q96CW9 530 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 FAM120BQ96EK7 910 aaKnown RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 GIMAP5Q96F15 307 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 SLC35A4Q96G79 324 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 RILPQ96NA2 401 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 PHF12Q96QT6 1004 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 OR52E6Q96RD3 313 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 ITPAQ9BY32 194 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 NPHS2Q9NP85 383 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 AGPAT4Q9NRZ5 378 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 FGFR1OP2Q9NVK5 253 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 FAM53CQ9NYF3 392 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 MAP10Q9P2G4 905 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 DCTN4Q9UJW0 460 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 MRTO4Q9UKD2 239 aaKnown RBP9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 DTX4Q9Y2E6 619 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 MYO18BQ8IUG5 2567 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 CPAMD8Q8IZJ3 1885 aa9.38□□□□□ -0.91
TUBBP2-201ENST00000454403 DUXAA6NLW8 204 aa9.37□□□□□ -0.91
TUBBP2-201ENST00000454403 CFLARO15519 480 aa9.37□□□□□ -0.91
TUBBP2-201ENST00000454403 TSPAN2O60636 221 aa9.37□□□□□ -0.91
TUBBP2-201ENST00000454403 SNX4O95219 450 aa9.37□□□□□ -0.91
TUBBP2-201ENST00000454403 RASAL1O95294 804 aa9.37□□□□□ -0.91
TUBBP2-201ENST00000454403 C6orf47O95873 294 aa9.37□□□□□ -0.91
TUBBP2-201ENST00000454403 ABCB1P08183 1280 aaPredicted RBP9.37□□□□□ -0.91
TUBBP2-201ENST00000454403 ZCCHC18P0CG32 403 aa9.37□□□□□ -0.91
TUBBP2-201ENST00000454403 UQCRC2P22695 453 aa9.37□□□□□ -0.91
TUBBP2-201ENST00000454403 PTGER1P34995 402 aa9.37□□□□□ -0.91
TUBBP2-201ENST00000454403 ZFP36L2P47974 494 aaKnown RBP9.37□□□□□ -0.91
TUBBP2-201ENST00000454403 TRPC1P48995 793 aa9.37□□□□□ -0.91
TUBBP2-201ENST00000454403 PRIM2P49643 509 aa9.37□□□□□ -0.91
TUBBP2-201ENST00000454403 ARFIP2P53365 341 aa9.37□□□□□ -0.91
TUBBP2-201ENST00000454403 PSMD4P55036 377 aaKnown RBP9.37□□□□□ -0.91
TUBBP2-201ENST00000454403 GAB1Q13480 694 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms