RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 FGD2Q7Z6J4 655 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 ZER1Q7Z7L7 766 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 CPOQ8IVL8 374 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 CBARPQ8N350 705 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 ZNF655Q8N720 491 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 OR52L1Q8NGH7 329 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 FUZQ9BT04 418 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 GSDMCQ9BYG8 508 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 IMP3Q9NV31 184 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 DIMT1Q9UNQ2 313 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 STX11O75558 287 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 RLN1P04808 185 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 ALPPP05187 535 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 SHC1P29353 583 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 GARNL3Q5VVW2 1013 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 KIF18BQ86Y91 864 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 PGBD3Q8N328 593 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 ZNF680Q8NEM1 530 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 HCAR2Q8TDS4 363 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 TIFAQ96CG3 184 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 SCLYQ96I15 445 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 ERMAPQ96PL5 475 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 C17orf62Q9BQA9 187 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 BTBD1Q9H0C5 482 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 BRF2Q9HAW0 419 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 TMEM138Q9NPI0 162 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 OR6C2Q9NZP2 312 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 PLXNA1Q9UIW2 1896 aa13.1□□□□□ -0.31
UBE2D3-210ENST00000453744 SMAD9O15198 467 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 SLC16A5O15375 505 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 ZNF821O75541 412 aaPredicted RBP13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 LEFTY1O75610 366 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 GATBO75879 557 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 AHRP35869 848 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 FAM27D1Q5T7N8 215 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 FCRLBQ6BAA4 426 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 SLC25A25Q6KCM7 469 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 PLBD1Q6P4A8 553 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 AIF1LQ9BQI0 150 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 KLF16Q9BXK1 252 aaPredicted RBP13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 MAB21L2Q9Y586 359 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 A0A0A6YYJ9 748 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 FFAR1O14842 300 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 INPPL1O15357 1258 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 SLC43A1O75387 559 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 MT-ND4P03905 459 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 LCN1P31025 176 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 SNRPGP62308 76 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 CRYZQ08257 329 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 SNTB2Q13425 540 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 ARTNQ5T4W7 220 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 SLCO4C1Q6ZQN7 724 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 TCTE3Q8IZS6 198 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 OR4M1Q8NGD0 313 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 OR6T1Q8NGN1 323 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 COQ10AQ96MF6 247 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 MED20Q9H944 212 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 B3GAT2Q9NPZ5 323 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 NFKBIL1Q9UBC1 381 aaPredicted RBP13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 BAIAP2Q9UQB8 552 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 CACNG2Q9Y698 323 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 PQBP1O60828 265 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 SEMG1P04279 462 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 MSL3P1P0C860 447 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 MGAT3Q09327 533 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 DOC2BQ14184 412 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 GALEQ14376 348 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 BTN2A2Q8WVV5 523 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 ZNF354BQ96LW1 612 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 GINS4Q9BRT9 223 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 TMEM43Q9BTV4 400 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 C1QTNF6Q9BXI9 259 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 FKBP14Q9NWM8 211 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 PCDHGB7Q9Y5F8 929 aa13.09□□□□□ -0.31
UBE2D3-210ENST00000453744 TRBV5-4A0A0C4DH59 114 aa13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 QSOX1O00391 747 aa13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 PI15O43692 258 aa13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 UGDHO60701 494 aa13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 POP7O75817 140 aaKnown RBP13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 PROS1P07225 676 aa13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 H2AFB2P0C5Z0 115 aa13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 ACADMP11310 421 aa13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 SLC1A3P43003 542 aa13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 KCNC3Q14003 757 aa13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 GLYR1Q49A26 553 aaPredicted RBP13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 SRFBP1Q8NEF9 429 aaKnown RBP13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 OR9A1PQ8NGU1 263 aa13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 OR8K5Q8NH50 307 aa13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 ZNF461Q8TAF7 563 aa13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 DCLRE1CQ96SD1 692 aaKnown RBP13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 RHBGQ9H310 441 aa13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 PIGUQ9H490 435 aa13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 PHF11Q9UIL8 331 aa13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 FBXO9Q9UK97 447 aaPredicted RBP13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 CDV3Q9UKY7 258 aaKnown RBP13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 EXO1Q9UQ84 846 aaKnown RBP13.08□□□□□ -0.31
UBE2D3-210ENST00000453744 GFYI3L273 518 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 GNB5O14775 395 aa13.08□□□□□ -0.32
UBE2D3-210ENST00000453744 GRM6O15303 877 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms