RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 DNAJB5O75953 348 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 KRT75O95678 551 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 CT45A8P0DMV1 189 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 CT45A9P0DMV2 189 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 PPIBP23284 216 aaKnown RBP10.73□□□□□ -0.69
SCN9A-204ENST00000452182 SOX11P35716 441 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 CHI3L1P36222 383 aaPredicted RBP10.73□□□□□ -0.69
SCN9A-204ENST00000452182 PRIM2P49643 509 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 MNAT1P51948 309 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 PRKAG1P54619 331 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 PSG6Q00889 435 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 NFYCQ13952 458 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 CT45A2Q5DJT8 189 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 CRB2Q5IJ48 1285 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 HLA-DQA1Q5Y7H0 255 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 TCTN3Q6NUS6 607 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 HACD2Q6Y1H2 254 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 DNAJC14Q6Y2X3 702 aaPredicted RBP10.73□□□□□ -0.69
SCN9A-204ENST00000452182 SZRD1Q7Z422 152 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 RPS19BP1Q86WX3 136 aaKnown RBP10.73□□□□□ -0.69
SCN9A-204ENST00000452182 MSRB3Q8IXL7 192 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 OR5AK3PQ8NH89 298 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 BRIX1Q8TDN6 353 aaKnown RBP10.73□□□□□ -0.69
SCN9A-204ENST00000452182 RCN3Q96D15 328 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 STACQ99469 402 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 NPAS2Q99743 824 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 ITPAQ9BY32 194 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 ACTRT3Q9BYD9 372 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 PRORYQ9H606 182 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 TPT1P8Q9HAU6 139 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 ARL8BQ9NVJ2 186 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 GID8Q9NWU2 228 aa10.73□□□□□ -0.69
SCN9A-204ENST00000452182 PTPRQQ9UMZ3 2332 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 FRG2CA6NGY1 282 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 DUXAA6NLW8 204 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 FXYD1O00168 92 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 CLIC1O00299 241 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 TO15178 435 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 ACOX3O15254 700 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 ASNA1O43681 348 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 NKX2-2O95096 273 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 MAN2A2P49641 1150 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 MVDP53602 400 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 MLF1P58340 268 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 LASP1Q14847 261 aaKnown RBP10.72□□□□□ -0.69
SCN9A-204ENST00000452182 ZNHIT3Q15649 155 aaPredicted RBP10.72□□□□□ -0.69
SCN9A-204ENST00000452182 MEP1AQ16819 746 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 GTDC1Q4AE62 458 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 RUNDC3AQ59EK9 446 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 AGAP7PQ5VUJ5 663 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 DESI1Q6ICB0 168 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 CDC73Q6P1J9 531 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 CLEC4FQ8N1N0 589 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 SLC15A4Q8N697 577 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 WNT2BQ93097 391 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 LRRC58Q96CX6 371 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 HSPBAP1Q96EW2 488 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 LCORQ96JN0 433 aaPredicted RBP10.72□□□□□ -0.69
SCN9A-204ENST00000452182 ZNF354BQ96LW1 612 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 CNTNAP3BQ96NU0 1288 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 ANKRD27Q96NW4 1050 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 AGAP4Q96P64 663 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 GAL3ST4Q96RP7 486 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 CGREF1Q99674 301 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 CNTNAP3Q9BZ76 1288 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 ZNF552Q9H707 407 aaPredicted RBP10.72□□□□□ -0.69
SCN9A-204ENST00000452182 DUSP22Q9NRW4 184 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 PLSCR2Q9NRY7 297 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 FAF1Q9UNN5 650 aaPredicted RBP10.72□□□□□ -0.69
SCN9A-204ENST00000452182 CORO2BQ9UQ03 480 aa10.72□□□□□ -0.69
SCN9A-204ENST00000452182 YARS2Q9Y2Z4 477 aaKnown RBP10.72□□□□□ -0.69
SCN9A-204ENST00000452182 ACACBO00763 2458 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 CCT8L1PA6NM43 557 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 A8MUI8 341 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 AIM2O14862 343 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 AGR2O95994 175 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 GPX2P18283 190 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 MATN1P21941 496 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 CALB2P22676 271 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 ANXA11P50995 505 aaKnown RBP10.71□□□□□ -0.69
SCN9A-204ENST00000452182 CCL11P51671 97 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 ZNF155Q12901 538 aaPredicted RBP10.71□□□□□ -0.69
SCN9A-204ENST00000452182 FADDQ13158 208 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 TBR1Q16650 682 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 PIGGQ5H8A4 983 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 ACER2Q5QJU3 275 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 C8orf82Q6P1X6 216 aaPredicted RBP10.71□□□□□ -0.69
SCN9A-204ENST00000452182 C6orf89Q6UWU4 347 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 GPR155Q7Z3F1 870 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 TAGAPQ8N103 731 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 SLC16A11Q8NCK7 471 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 FDCSPQ8NFU4 85 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 OR52N2Q8NGI0 321 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 C16orf58Q96GQ5 468 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 NSL1Q96IY1 281 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 SLC35G5Q96KT7 338 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 SH3GL1Q99961 368 aa10.71□□□□□ -0.69
SCN9A-204ENST00000452182 HOPXQ9BPY8 73 aaPredicted RBP10.71□□□□□ -0.69
SCN9A-204ENST00000452182 NXF5Q9H1B4 397 aaKnown RBP10.71□□□□□ -0.69
SCN9A-204ENST00000452182 PIGUQ9H490 435 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms