RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	DTX3L	Q8TDB6	740 aa		7.91	□□□□□ -1.14
HCG18-238	ENST00000449544	C16orf78	Q8WTQ4	265 aa		7.91	□□□□□ -1.14
HCG18-238	ENST00000449544	TMBIM1	Q969X1	311 aa		7.91	□□□□□ -1.14
HCG18-238	ENST00000449544	PINK1	Q9BXM7	581 aa		7.91	□□□□□ -1.14
HCG18-238	ENST00000449544	PARPBP	Q9NWS1	579 aa		7.91	□□□□□ -1.14
HCG18-238	ENST00000449544	ASB6	Q9NWX5	421 aa		7.91	□□□□□ -1.14
HCG18-238	ENST00000449544	GRHL1	Q9NZI5	618 aa		7.91	□□□□□ -1.14
HCG18-238	ENST00000449544	CBLC	Q9ULV8	474 aa		7.91	□□□□□ -1.14
HCG18-238	ENST00000449544	BHMG1	C9JSJ3	638 aa	Predicted RBP	7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	HCRTR1	O43613	425 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	RSL1D1	O76021	490 aa	Known RBP	7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	PAPLN	O95428	1278 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	AIFM1	O95831	613 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	BCHE	P06276	602 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	GABRA1	P14867	456 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	CPZ	Q66K79	652 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	VASH1	Q7L8A9	365 aa	Predicted RBP	7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	PIAS4	Q8N2W9	510 aa	Predicted RBP	7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	SLC38A4	Q969I6	547 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	SMAD5	Q99717	465 aa	Known RBP	7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	MKLN1	Q9UL63	735 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	DAPP1	Q9UN19	280 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	LIPT1	Q9Y234	373 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	CCDC160	A6NGH7	325 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	PEX14	O75381	377 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	CBL	P22681	906 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	ELAVL4	P26378	380 aa	Known RBP	7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	SSTR4	P31391	388 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	C17orf67	Q0P5P2	114 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	POU4F3	Q15319	338 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	C9orf135	Q5VTT2	229 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	CARD17	Q5XLA6	110 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	SPINK14	Q6IE38	97 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	WDR93	Q6P2C0	686 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	RGS9BP	Q6ZS82	235 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	UTP15	Q8TED0	518 aa	Known RBP	7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	PHF21A	Q96BD5	680 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	PDLIM5	Q96HC4	596 aa	Known RBP	7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	MAGEB18	Q96M61	343 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	EIF3K	Q9UBQ5	218 aa	Known RBP	7.9	□□□□□ -1.14
HCG18-238	ENST00000449544	ARL2BP	Q9Y2Y0	163 aa		7.9	□□□□□ -1.14
HCG18-238	ENST00000449544		A0A1W2PPW3	197 aa		7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	C2orf72	A6NCS6	295 aa		7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	PSMA4	P25789	261 aa	Known RBP	7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	PIGA	P37287	484 aa		7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	ZNF844	Q08AG5	666 aa		7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	TECRL	Q5HYJ1	363 aa		7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	ZNF678	Q5SXM1	525 aa		7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	FAM111B	Q6SJ93	734 aa		7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	CD163	Q86VB7	1156 aa		7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	FDCSP	Q8NFU4	85 aa		7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	OR9Q1	Q8NGQ5	310 aa		7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	ABTB1	Q969K4	478 aa	Predicted RBP	7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	VRK1	Q99986	396 aa	Predicted RBP	7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	C12orf49	Q9H741	205 aa		7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	CHST11	Q9NPF2	352 aa		7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	UBQLN4	Q9NRR5	601 aa		7.9	□□□□□ -1.15
HCG18-238	ENST00000449544	CASQ2	O14958	399 aa	Predicted RBP	7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	ANKRD28	O15084	1053 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	TPST2	O60704	377 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	IFNG	P01579	166 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	CARD18	P57730	90 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	ECH1	Q13011	328 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	TBR1	Q16650	682 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	TTC33	Q6PID6	262 aa	Predicted RBP	7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	EXOC3L1	Q86VI1	746 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	POGLUT1	Q8NBL1	392 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	GIMAP7	Q8NHV1	300 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	INTS12	Q96CB8	462 aa	Known RBP	7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	ZNF501	Q96CX3	271 aa	Predicted RBP	7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	DDIT4L	Q96D03	193 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	OMA1	Q96E52	524 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	THTPA	Q9BU02	230 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	ELL3	Q9HB65	397 aa	Predicted RBP	7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	OXSM	Q9NWU1	459 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	CNIH4	Q9P003	139 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	CKAP5	Q14008	2032 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	SON	P18583	2426 aa	Known RBP	7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	SH3PXD2B	A1X283	911 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	BLOC1S5-TXNDC5	H3BN57	136 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	IFNW1	P05000	195 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	CHRNG	P07510	517 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	ANKRD34C	P0C6C1	535 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	CD79A	P11912	226 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	SLC6A9	P48067	706 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	HK2	P52789	917 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	GPX6	P59796	221 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	LGALS3BP	Q08380	585 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	FAM98B	Q52LJ0	330 aa	Known RBP	7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	KRTCAP3	Q53RY4	240 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	SAMD4B	Q5PRF9	694 aa	Known RBP	7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	PRAMEF8	Q5VWM4	474 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	PRAMEF7	Q5VXH5	474 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	C18orf63	Q68DL7	685 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	ARL9	Q6T311	187 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	ARHGAP22	Q7Z5H3	698 aa		7.89	□□□□□ -1.15
HCG18-238	ENST00000449544	SLC34A3	Q8N130	599 aa		7.89	□□□□□ -1.15

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