RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 OFCC1Q8IZS5 231 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 ARHGEF39Q8N4T4 335 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 OR7G2Q8NG99 324 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 OR9A4Q8NGU2 314 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 MVB12AQ96EY5 273 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 GIMAP5Q96F15 307 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 C16orf58Q96GQ5 468 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 RBM18Q96H35 190 aaKnown RBP11.77□□□□□ -0.53
NUP85-202ENST00000449421 ALPK1Q96QP1 1244 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 YIPF4Q9BSR8 244 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 GRIP2Q9C0E4 1043 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 RIBC2Q9H4K1 309 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 GAREM1Q9H706 876 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 POLE3Q9NRF9 147 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 PAPOLBQ9NRJ5 636 aaKnown RBP11.77□□□□□ -0.53
NUP85-202ENST00000449421 DUSP22Q9NRW4 184 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 SEMA4GQ9NTN9 838 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 ACER3Q9NUN7 267 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 UCKL1Q9NWZ5 548 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 SCN3BQ9NY72 215 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 NLGN3Q9NZ94 848 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 NCDNQ9UBB6 729 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 KCND3Q9UK17 655 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 SATB2Q9UPW6 733 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 MRPS2Q9Y399 296 aaKnown RBP11.77□□□□□ -0.53
NUP85-202ENST00000449421 PCDHGB5Q9Y5G0 923 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 CACNA1EQ15878 2313 aa11.77□□□□□ -0.53
NUP85-202ENST00000449421 A0A0A6YYC8 382 aaPredicted RBP11.76□□□□□ -0.53
NUP85-202ENST00000449421 LNP1A1A4G5 178 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 SYNDIG1LA6NDD5 238 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 ZNF860A6NHJ4 632 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 TRIM64CA6NLI5 447 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 I3L1I5 382 aaPredicted RBP11.76□□□□□ -0.53
NUP85-202ENST00000449421 FAAHO00519 579 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 TOX3O15405 576 aaPredicted RBP11.76□□□□□ -0.53
NUP85-202ENST00000449421 FGF17O60258 216 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 MRPS14O60783 128 aaKnown RBP11.76□□□□□ -0.53
NUP85-202ENST00000449421 RDH16O75452 317 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 LGI1O95970 557 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 H1F0P07305 194 aaKnown RBP11.76□□□□□ -0.53
NUP85-202ENST00000449421 GUSBP08236 651 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 LINGO3P0C6S8 592 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 CCDC159P0C7I6 412 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 MSL3P1P0C860 447 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 PRKAR1BP31321 381 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 GABRA4P48169 554 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 HSD17B7P56937 341 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 IL5RAQ01344 420 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 SPEM2Q0P670 501 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 LARS2Q15031 903 aaKnown RBP11.76□□□□□ -0.53
NUP85-202ENST00000449421 ZNHIT3Q15649 155 aaPredicted RBP11.76□□□□□ -0.53
NUP85-202ENST00000449421 LTB4RQ15722 352 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 EXOC3L2Q2M3D2 409 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 DEFB110Q30KQ9 67 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 EIPR1Q53HC9 387 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 ZNF311Q5JNZ3 666 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 C6orf141Q5SZD1 244 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 RNF220Q5VTB9 566 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 TCEAL6Q6IPX3 200 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 DHRS4L2Q6PKH6 230 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 DGLUCYQ7Z3D6 616 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 TSEN54Q7Z6J9 526 aaKnown RBP11.76□□□□□ -0.53
NUP85-202ENST00000449421 OR4N5Q8IXE1 308 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 DEPDC4Q8N2C3 294 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 SLC25A45Q8N413 288 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 GPR32P1Q8NGA4 272 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 SAP25Q8TEE9 199 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 TCEAL3Q969E4 200 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 SLC35A4Q96G79 324 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 PHOX2BQ99453 314 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 FEVQ99581 238 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 DPYSL5Q9BPU6 564 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 FNDC11Q9BVV2 318 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 GABARAPL3Q9BY60 117 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 SMOC1Q9H4F8 434 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 CXorf56Q9H5V9 222 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 PARD6AQ9NPB6 346 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 EQTNQ9NQ60 294 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 FSCN3Q9NQT6 498 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 PRTFDC1Q9NRG1 225 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 STARD5Q9NSY2 213 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 SEMA5BQ9P283 1151 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 SERTAD3Q9UJW9 196 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 MGAT4BQ9UQ53 548 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 TPRKBQ9Y3C4 175 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 PCDHGB2Q9Y5G2 931 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 USP34Q70CQ2 3546 aa11.76□□□□□ -0.53
NUP85-202ENST00000449421 TDRD6O60522 2096 aaKnown RBP11.75□□□□□ -0.53
NUP85-202ENST00000449421 IGHV5-51A0A0C4DH38 117 aa11.75□□□□□ -0.53
NUP85-202ENST00000449421 PRAMEF27A3QJZ7 478 aa11.75□□□□□ -0.53
NUP85-202ENST00000449421 CDX4O14627 284 aaPredicted RBP11.75□□□□□ -0.53
NUP85-202ENST00000449421 PCDHGA12O60330 932 aa11.75□□□□□ -0.53
NUP85-202ENST00000449421 LDB3O75112 727 aa11.75□□□□□ -0.53
NUP85-202ENST00000449421 CLIC3O95833 236 aa11.75□□□□□ -0.53
NUP85-202ENST00000449421 CHRM4P08173 479 aa11.75□□□□□ -0.53
NUP85-202ENST00000449421 TNFRSF1BP20333 461 aa11.75□□□□□ -0.53
NUP85-202ENST00000449421 EEF1B2P24534 225 aaKnown RBP11.75□□□□□ -0.53
NUP85-202ENST00000449421 EPHA8P29322 1005 aaPredicted RBP11.75□□□□□ -0.53
NUP85-202ENST00000449421 IFNGR2P38484 337 aa11.75□□□□□ -0.53
NUP85-202ENST00000449421 LIMS1P48059 325 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms