RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CLEC4AQ9UMR7 237 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 VDAC3Q9Y277 283 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 GGT3PA6NGU5 568 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 SRRM3A6NNA2 597 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 PROM1O43490 865 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 IGHA2P01877 340 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 PF4P02776 101 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 TMIGD3P0DMS9 266 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 IDUAP35475 653 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 SERPINB5P36952 375 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 MEOX1P50221 254 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 RPL11P62913 178 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 VLDLRP98155 873 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 BTNL3Q6UXE8 466 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 LGI4Q8N135 537 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 ACTRT2Q8TDY3 377 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 TP53INP1Q96A56 240 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 SGCZQ96LD1 299 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 HIPK2Q9H2X6 1198 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 CDC42EP3Q9UKI2 254 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 NOSIPQ9Y314 301 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 V9GYQ6 96 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 PCP4L1A6NKN8 68 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 GYG2O15488 501 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 IGHV4-34P06331 123 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 SERPINA6P08185 405 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 PNLIPP16233 465 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 AHRP35869 848 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 GGT2P36268 569 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 LIMK1P53667 647 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 IL18R1Q13478 541 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 OLIG2Q13516 323 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 RTP5Q14D33 572 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 JMJD6Q6NYC1 403 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 RFLNAQ6ZTI6 216 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 TCEANCQ8N8B7 351 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 DCUN1D5Q9BTE7 237 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 CD244Q9BZW8 370 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 POPDC3Q9HBV1 291 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 GEMIN8Q9NWZ8 242 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 NFS1Q9Y697 457 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 MYO18BQ8IUG5 2567 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 CHD3Q12873 2000 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 EFSO43281 561 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 ENSAO43768 121 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 SCGB2A1O75556 95 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 SERPINA3P01011 423 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF888P0CJ79 500 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 THRAP10827 490 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 ARSDP51689 593 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 SSTP61278 116 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 FASTKQ14296 549 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 EEF1A1P5Q5VTE0 462 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 IL23RQ5VWK5 629 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 ANKRD22Q5VYY1 191 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 DHDDSQ86SQ9 333 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 ATP6V1G3Q96LB4 118 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 DUSP26Q9BV47 211 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 HOXD1Q9GZZ0 328 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 ELOVL7A1L3X0 281 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 DDCP20711 480 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 CFL1P23528 166 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 CD1CP29017 333 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 PBX1P40424 430 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 PTGIRP43119 386 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 LGALS3BPQ08380 585 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 MERTKQ12866 999 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLC10A2Q12908 348 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 TMEM215Q68D42 235 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR5M10Q6IEU7 315 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR4C11Q6IEV9 310 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 XKRXQ6PP77 449 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 EIF3MQ7L2H7 374 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 SFTPA1Q8IWL2 248 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 TP53I13Q8NBR0 393 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR2L3Q8NG85 312 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 EPS8L3Q8TE67 593 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 TP63Q9H3D4 680 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLC40A1Q9NP59 571 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 TRIM36Q9NQ86 728 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 SESN1Q9Y6P5 492 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 LOC285095A0A1B0GVY8 99 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 C9orf172C9J069 976 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 CD1EP15812 388 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 GABRA3P34903 492 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 FASLGP48023 281 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 HERVK_113P63132 956 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 ERVK-8P63133 956 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 SCN1BQ07699 218 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 GAS6Q14393 721 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 KCNJ8Q15842 424 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 CPEB2Q7Z5Q1 589 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 FTMTQ8N4E7 242 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF610Q8N9Z0 462 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 L3MBTL4Q8NA19 623 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR6Y1Q8NGX8 325 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 TCP10LQ8TDR4 215 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 KISS1RQ969F8 398 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 ERVK-6Q9BXR3 956 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 CCDC90BQ9GZT6 254 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms