RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 GREB1Q4ZG55 1949 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 ANXA2P2A6NMY6 339 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 SULT1C2O00338 296 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 LANCL1O43813 399 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 RAD1O60671 282 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 SELPP16109 830 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 CAV3P56539 151 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 KIAA1024LP59773 190 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 WDR5P61964 334 aaKnown RBP18.14■□□□□ 0.49
HMGA1-205ENST00000447654 STX4Q12846 297 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 HLXQ14774 488 aaPredicted RBP18.14■□□□□ 0.49
HMGA1-205ENST00000447654 SLC22A10Q63ZE4 541 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 ZNF621Q6ZSS3 439 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 OAFQ86UD1 273 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 SIDT2Q8NBJ9 832 aaKnown RBP18.14■□□□□ 0.49
HMGA1-205ENST00000447654 FAM71CQ8NEG0 241 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 OR13C4Q8NGS5 318 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 GEMIN6Q8WXD5 167 aaKnown RBP18.14■□□□□ 0.49
HMGA1-205ENST00000447654 CMTM7Q96FZ5 175 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 DDOQ99489 341 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 PTDSS2Q9BVG9 487 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 FGF20Q9NP95 211 aaPredicted RBP18.14■□□□□ 0.49
HMGA1-205ENST00000447654 ZSCAN32Q9NX65 697 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 MTMR11A4FU01 709 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 C2orf81A6NN90 581 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 HMSDA8MTL9 139 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 FFAR2O15552 330 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 RGS11O94810 467 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 GABRA1P14867 456 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 RAB3BP20337 219 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 DEFA5Q01523 94 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 DSC2Q02487 901 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 SLC10A7Q0GE19 358 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 GK2Q14410 553 aaPredicted RBP18.13■□□□□ 0.49
HMGA1-205ENST00000447654 CHRNA6Q15825 494 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 UGT8Q16880 541 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 SLC36A2Q495M3 483 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 SPDYE7PQ495Y7 208 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 TMIGD1Q6UXZ0 262 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 ARIH2OSQ8N7S6 290 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 OR8J2Q8NGG1 315 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 WDR20Q8TBZ3 569 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 PXYLP1Q8TE99 480 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 TRIB3Q96RU7 358 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 DPH2Q9BQC3 489 aaPredicted RBP18.13■□□□□ 0.49
HMGA1-205ENST00000447654 CINPQ9BW66 212 aaPredicted RBP18.13■□□□□ 0.49
HMGA1-205ENST00000447654 SORBS1Q9BX66 1292 aaKnown RBP18.13■□□□□ 0.49
HMGA1-205ENST00000447654 FBXO44Q9H4M3 255 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 CDCP1Q9H5V8 836 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 DDX31Q9H8H2 851 aaKnown RBP18.13■□□□□ 0.49
HMGA1-205ENST00000447654 TPT1P8Q9HAU6 139 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 SCN5AQ14524 2016 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 FFAR3O14843 346 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 GPR42O15529 346 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 SC5DO75845 299 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 GADD45GO95257 159 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 ITGB8P26012 769 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 ETV5P41161 510 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 TTPAP49638 278 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 UBXN2BQ14CS0 331 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 HECTD3Q5T447 861 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 ZNF770Q6IQ21 691 aaPredicted RBP18.13■□□□□ 0.49
HMGA1-205ENST00000447654 SLC25A25Q6KCM7 469 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 FBXL22Q6P050 247 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 PAQR6Q6TCH4 344 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 CRIPAKQ8N1N5 446 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 ARRDC2Q8TBH0 407 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 FBXO32Q969P5 355 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 SEPT5Q99719 369 aaPredicted RBP18.13■□□□□ 0.49
HMGA1-205ENST00000447654 UCK1Q9HA47 277 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 SLAMF7Q9NQ25 335 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 ERVK-19Q9WJR5 959 aa18.13■□□□□ 0.49
HMGA1-205ENST00000447654 EXOSC1Q9Y3B2 195 aaKnown RBP18.13■□□□□ 0.49
HMGA1-205ENST00000447654 NFATC1O95644 943 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 RLN2P04090 185 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 ALDOBP05062 364 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 SDC1P18827 310 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 MAPK3P27361 379 aaPredicted RBP18.12■□□□□ 0.49
HMGA1-205ENST00000447654 STARP49675 285 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 SELENOPP49908 381 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 NR0B1P51843 470 aaKnown RBP18.12■□□□□ 0.49
HMGA1-205ENST00000447654 C21orf58P58505 322 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 TAP2Q03519 686 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 DUSP4Q13115 394 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 PRSS55Q6UWB4 352 aaPredicted RBP18.12■□□□□ 0.49
HMGA1-205ENST00000447654 UMODL1-AS1Q8N2C9 162 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 STK40Q8N2I9 435 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 NEIL3Q8TAT5 605 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 CSGALNACT1Q8TDX6 532 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 PSMG2Q969U7 264 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 ORAI1Q96D31 301 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 TCEAL7Q9BRU2 100 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 SAP130Q9H0E3 1048 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 NPDC1Q9NQX5 325 aaPredicted RBP18.12■□□□□ 0.49
HMGA1-205ENST00000447654 ASB6Q9NWX5 421 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 SPHK1Q9NYA1 384 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 MYEF2Q9P2K5 600 aaKnown RBP18.12■□□□□ 0.49
HMGA1-205ENST00000447654 MKL2Q9ULH7 1088 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 FZD4Q9ULV1 537 aa18.12■□□□□ 0.49
HMGA1-205ENST00000447654 PEX14O75381 377 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms