RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 C9orf40Q8IXQ3 194 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 FBXL14Q8N1E6 418 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 NIPA2Q8N8Q9 360 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 STEAP2Q8NFT2 490 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 OR9A1PQ8NGU1 263 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 OR6K3Q8NGY3 331 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 OR14A16Q8NHC5 309 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 UHMK1Q8TAS1 419 aaKnown RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 ZNF721Q8TF20 911 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 HSD17B8Q92506 261 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 DAZLQ92904 295 aaKnown RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 SMARCE1Q969G3 411 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 CCDC34Q96HJ3 373 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 DNAJC1Q96KC8 554 aaKnown RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 ZNF830Q96NB3 372 aaPredicted RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 CARD6Q9BX69 1037 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 NDST4Q9H3R1 872 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 GRIP1Q9Y3R0 1128 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 FKBP7Q9Y680 259 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 A0A1B0GUS0 222 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 CLDN34H7C241 214 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 ABCD4O14678 606 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 GCM2O75603 506 aaPredicted RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 STK10O94804 968 aaKnown RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 AGTP01019 485 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 SLPIP03973 132 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 APOA4P06727 396 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 SLC35G6P0C7Q6 338 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 SMIM10L1P0DMW3 83 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 CDK11BP21127 795 aaKnown RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 HRH2P25021 359 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 PSMA3P25788 255 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 SERPINB3P29508 390 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 ADRA1AP35348 466 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 DEKP35659 375 aaKnown RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 TNNT3P45378 269 aaPredicted RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 HNRNPFP52597 415 aaKnown RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 TOMM20Q15388 145 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 BCL2A1Q16548 175 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 PHKG1Q16816 387 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 CASC10Q5T4H9 136 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 CAPN13Q6MZZ7 669 aaPredicted RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 ZNF544Q6NX49 715 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 B3GLCTQ6Y288 498 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 C17orf107Q6ZR85 190 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 DOK3Q7L591 496 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 PALM2Q8IXS6 379 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 CA13Q8N1Q1 262 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 BPIFB2Q8N4F0 458 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 TC2NQ8N9U0 490 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 SPPL2AQ8TCT8 520 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 SLC2A12Q8TD20 617 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 TMIGD2Q96BF3 282 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 MTBPQ96DY7 904 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 SMIM10Q96HG1 83 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 AJUBAQ96IF1 538 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 RADILQ96JH8 1075 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 SNX18Q96RF0 628 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 AGPAT1Q99943 283 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 SYT11Q9BT88 431 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 OR8D2Q9GZM6 311 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 FANCFQ9NPI8 374 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 NECAP2Q9NVZ3 263 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 CORO1CQ9ULV4 474 aaPredicted RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 MOKQ9UQ07 419 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 ZNF175Q9Y473 711 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 CLCA3PQ9Y6N3 262 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 FRAS1Q86XX4 4008 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 SYNDIG1LA6NDD5 238 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 IQCF5A8MTL0 148 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 PSMD12O00232 456 aaPredicted RBP2.85□□□□□ -1.95
PMS1-215ENST00000447232 CEP104O60308 925 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 ULK1O75385 1050 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 ETHE1O95571 254 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 STAMBPO95630 424 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 PNPP00491 289 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 ALDOAP04075 364 aaKnown RBP2.85□□□□□ -1.95
PMS1-215ENST00000447232 IGKV3-11P04433 115 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 MSMBP08118 114 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 ENO2P09104 434 aaPredicted RBP2.85□□□□□ -1.95
PMS1-215ENST00000447232 ZNF888P0CJ79 500 aaPredicted RBP2.85□□□□□ -1.95
PMS1-215ENST00000447232 HSD17B2P37059 387 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 CASP3P42574 277 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 GDF5P43026 501 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 MASP1P48740 699 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 SLC37A1P57057 533 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 DOC2AQ14183 400 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 PDK2Q15119 407 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 RPS6KA2Q15349 733 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 TAF9Q16594 264 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 CD276Q5ZPR3 534 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 GABRG1Q8N1C3 465 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 STPG3Q8N7X2 389 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 MFSD9Q8NBP5 474 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 PPFIBP2Q8ND30 876 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 FAM110DQ8TAY7 271 aaPredicted RBP2.85□□□□□ -1.95
PMS1-215ENST00000447232 FNDC9Q8TBE3 224 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 UTP15Q8TED0 518 aaKnown RBP2.85□□□□□ -1.95
PMS1-215ENST00000447232 ZNF480Q8WV37 535 aa2.85□□□□□ -1.95
PMS1-215ENST00000447232 NXNL1Q96CM4 212 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms