RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ROPN1LQ96C74 230 aa16.67■□□□□ 0.26
TRAPPC4-203ENST00000447216 ACTRT3Q9BYD9 372 aa16.67■□□□□ 0.26
TRAPPC4-203ENST00000447216 ING2Q9H160 280 aa16.67■□□□□ 0.26
TRAPPC4-203ENST00000447216 OR51I1Q9H343 314 aa16.67■□□□□ 0.26
TRAPPC4-203ENST00000447216 FAF1Q9UNN5 650 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC4-203ENST00000447216 CFAP47Q6ZTR5 3102 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 WWP2O00308 870 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 MAN1A2O60476 641 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 CCL11P51671 97 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 MVDP53602 400 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 UCNP55089 124 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 CXADRP78310 365 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 SLC25A3Q00325 362 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 RABL3Q5HYI8 236 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 HLA-DQA1Q5Y7H0 255 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 B3GNTL1Q67FW5 361 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 NANOGP8Q6NSW7 305 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 TCTN3Q6NUS6 607 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 CDC73Q6P1J9 531 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 HACD2Q6Y1H2 254 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 SLC44A2Q8IWA5 706 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 C10orf111Q8N326 155 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 GALNT16Q8N428 558 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 HORMAD2Q8N7B1 307 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 ZNF441Q8N8Z8 693 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 SLC16A11Q8NCK7 471 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 PSMF1Q92530 271 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 OR7D2Q96RA2 312 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 LHPPQ9H008 270 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 NXF5Q9H1B4 397 aaKnown RBP16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 NANOGQ9H9S0 305 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 CFL2Q9Y281 166 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 KCNMB2Q9Y691 235 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 KCNE3Q9Y6H6 103 aa16.66■□□□□ 0.26
TRAPPC4-203ENST00000447216 GXYLT2A0PJZ3 443 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 EBAG9O00559 213 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 NPPAP01160 153 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 ALOX5P09917 674 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 OR12D1P0DN82 309 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 ETFAP13804 333 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 GABRA3P34903 492 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 CRATP43155 626 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 MAN2A2P49641 1150 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 NR0B1P51843 470 aaKnown RBP16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 PSME3P61289 254 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 PSG6Q00889 435 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 BNIP1Q12981 228 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 DUSP5Q16690 384 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 EXOSC6Q5RKV6 272 aaKnown RBP16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 C8orf82Q6P1X6 216 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 GPR155Q7Z3F1 870 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 CDRT4Q8N9R6 151 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 RBM15BQ8NDT2 890 aaKnown RBP16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 OR52N2Q8NGI0 321 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 OR8K3Q8NH51 312 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 CDS1Q92903 461 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 RAB8BQ92930 207 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 SLC35A4Q96G79 324 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 CRELD1Q96HD1 420 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 LMF1Q96S06 567 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 GPATCH1Q9BRR8 931 aaKnown RBP16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 LMF2Q9BU23 707 aaKnown RBP16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 THUMPD3Q9BV44 507 aaKnown RBP16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 CDCP1Q9H5V8 836 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 ZMIZ1Q9ULJ6 1067 aa16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 GPR55Q9Y2T6 319 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC4-203ENST00000447216 MGAQ8IWI9 3026 aa16.64■□□□□ 0.26
TRAPPC4-203ENST00000447216 EVPLLA8MZ36 301 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 ZNF354AO60765 605 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 KRT16P08779 473 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 CT45A8P0DMV1 189 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 CT45A9P0DMV2 189 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 PPIBP23284 216 aaKnown RBP16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 SLC6A2P23975 617 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 MAP3K8P41279 467 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 PPICP45877 212 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 KHKP50053 298 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 MNAT1P51948 309 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 RGNQ15493 299 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 ZNHIT3Q15649 155 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 CT45A2Q5DJT8 189 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 H3F3CQ6NXT2 135 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 JMJD6Q6NYC1 403 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 RPS19BP1Q86WX3 136 aaKnown RBP16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 PRR22Q8IZ63 422 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 OR4N2Q8NGD1 307 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 OR5L2Q8NGL0 311 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 NUBPLQ8TB37 319 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 MIPOL1Q8TD10 442 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 GPR151Q8TDV0 419 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 ADAMTS15Q8TE58 950 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 PIK3R3Q92569 461 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 HOXB13Q92826 284 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 TMEM125Q96AQ2 219 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 LCORQ96JN0 433 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 BTBD9Q96Q07 612 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 PIF1Q9H611 641 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 CMTM6Q9NX76 183 aa16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 GMPR2Q9P2T1 348 aaKnown RBP16.64■□□□□ 0.25
TRAPPC4-203ENST00000447216 LOC400499M0QZD8 3231 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms