RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 ANXA3P12429 323 aa15.75■□□□□ 0.11
TCOF1-206ENST00000445265 GABRA3P34903 492 aa15.75■□□□□ 0.11
TCOF1-206ENST00000445265 LIPAP38571 399 aa15.75■□□□□ 0.11
TCOF1-206ENST00000445265 OR12D2P58182 307 aa15.75■□□□□ 0.11
TCOF1-206ENST00000445265 CST6Q15828 149 aa15.75■□□□□ 0.11
TCOF1-206ENST00000445265 TMIEQ8NEW7 156 aa15.75■□□□□ 0.11
TCOF1-206ENST00000445265 OR5D16Q8NGK9 328 aa15.75■□□□□ 0.11
TCOF1-206ENST00000445265 FAM83CQ9BQN1 747 aa15.75■□□□□ 0.11
TCOF1-206ENST00000445265 NTN4Q9HB63 628 aa15.75■□□□□ 0.11
TCOF1-206ENST00000445265 METTL15A6NJ78 407 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 GNSP15586 552 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 AHCYP23526 432 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 THRSPQ92748 146 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 OR4K3Q96R72 315 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 UCKL1Q9NWZ5 548 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 CNIH4Q9P003 139 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 ANTXRLA6NF34 631 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 LYRM1O43325 122 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 ZNF823P16415 610 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 NR4A2P43354 598 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 RIPPLY1Q0D2K3 151 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 ILKQ13418 452 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 GAS6Q14393 721 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 OXA1LQ15070 435 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 TBC1D25Q3MII6 688 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 STEAP3Q658P3 488 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 CYHR1Q6ZMK1 362 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 KLHDC8BQ8IXV7 354 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 EPHX3Q9H6B9 360 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 RANBP3Q9H6Z4 567 aaPredicted RBP15.74■□□□□ 0.11
TCOF1-206ENST00000445265 COPS7AQ9UBW8 275 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 BAIAP2Q9UQB8 552 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 CARD8Q9Y2G2 431 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 PCDHGA6Q9Y5G7 932 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 COL4A5P29400 1685 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 ASPDHA6ND91 283 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 SEC23BQ15437 767 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 PLBD1Q6P4A8 553 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 SLC38A5Q8WUX1 472 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 TREX2Q9BQ50 279 aaPredicted RBP15.74■□□□□ 0.11
TCOF1-206ENST00000445265 SAP130Q9H0E3 1048 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 OR1A2Q9Y585 309 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 TSPAN9O75954 239 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 HTR1AP08908 422 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 GIMD1P0DJR0 217 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 C5AR1P21730 350 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 KCNJ8Q15842 424 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 LEXMQ3ZCV2 418 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 HSD17B12Q53GQ0 312 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 DUS1LQ6P1R4 473 aaKnown RBP15.74■□□□□ 0.11
TCOF1-206ENST00000445265 ARHGAP11AQ6P4F7 1023 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 CNIH2Q6PI25 160 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 SPATA6Q9NWH7 488 aaPredicted RBP15.74■□□□□ 0.11
TCOF1-206ENST00000445265 ZNF225Q9UK10 706 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 ADAM29Q9UKF5 820 aa15.74■□□□□ 0.11
TCOF1-206ENST00000445265 GMFGO60234 142 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 PPM1BO75688 479 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 CAPNS1P04632 268 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 IDUAP35475 653 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 MAP3K8P41279 467 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 DECR1Q16698 335 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 FAM83HQ6ZRV2 1179 aaPredicted RBP15.73■□□□□ 0.11
TCOF1-206ENST00000445265 ZNF683Q8IZ20 524 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 OR2L5Q8NG80 312 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 RPLP0P6Q8NHW5 317 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 CCDC107Q8WV48 283 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 MS4A4EQ96PG1 132 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 TM9SF2Q99805 663 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 ACTR6Q9GZN1 396 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 TRBV4-1A0A0J9YWV2 114 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 A0A1W2PQ09 198 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 SNAPC5O75971 98 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 KLHL18O94889 574 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 CXCR1P25024 350 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 BMPR1AP36894 532 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 ADAM8P78325 824 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 COX20Q5RI15 118 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 CPOQ8IVL8 374 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 CHST4Q8NCG5 386 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 SFXN5Q8TD22 340 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 FOXJ1Q92949 421 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 WDR92Q96MX6 357 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 NIPSNAP1Q9BPW8 284 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 CENPOQ9BU64 300 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 FBXO8Q9NRD0 319 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 SCDO00767 359 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 ACTA2P62736 377 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 ACTG2P63267 376 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 SYPL1Q16563 259 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 NTRK2Q16620 822 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 BCL7AQ4VC05 210 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 ACOT11Q8WXI4 607 aaPredicted RBP15.73■□□□□ 0.11
TCOF1-206ENST00000445265 UBE2FQ969M7 185 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 HSPA12BQ96MM6 686 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 POLMQ9NP87 494 aaPredicted RBP15.73■□□□□ 0.11
TCOF1-206ENST00000445265 PLCXD1Q9NUJ7 323 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 C2orf74A8MZ97 194 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 SNAP47Q5SQN1 464 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 ACOT4Q8N9L9 421 aa15.73■□□□□ 0.11
TCOF1-206ENST00000445265 SYT14Q8NB59 555 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms