RNA–Protein interactions for RNA: ENST00000444409.1

AP001062.3-202, humanhuman

TSL 2 BASIC

Gene AP001062.3, Length 619 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001062.3-202ENST00000444409 ALDH3A1P30838 453 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 PLCXD2Q0VAA5 305 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 ERCC6LQ2NKX8 1250 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 CT45A2Q5DJT8 189 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 WLSQ5T9L3 541 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 RTL6Q6ICC9 239 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 ZNF585AQ6P3V2 769 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 Q6ZSR9 355 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 ACAD11Q709F0 780 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 NUP54Q7Z3B4 507 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 HOMEZQ8IX15 550 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 MREGQ8N565 214 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 OR7G2Q8NG99 324 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 OR2T11Q8NH01 316 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 NEIL3Q8TAT5 605 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 TCP10LQ8TDR4 215 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 ASB5Q8WWX0 329 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 RND1Q92730 232 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 VSTM2LQ96N03 204 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 BBS4Q96RK4 519 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 NODALQ96S42 347 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 TMEM109Q9BVC6 243 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 STMN4Q9H169 189 aaPredicted RBP12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 SLC6A15Q9H2J7 730 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 TUBB1Q9H4B7 451 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 RUBCNLQ9H714 662 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 EXO5Q9H790 373 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 MIEF1Q9NQG6 463 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 C1orf109Q9NX04 203 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 SENP1Q9P0U3 644 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 C15orf41Q9Y2V0 281 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 PCDHGB3Q9Y5G1 929 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 DNAJC15Q9Y5T4 150 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 V9GYY5 206 aaPredicted RBP12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 MYO9AB2RTY4 2548 aa12.51□□□□□ -0.41
AP001062.3-202ENST00000444409 PKDREJQ9NTG1 2253 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 OR6C70A6NIJ9 312 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 RGS14O43566 566 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 NPHS1O60500 1241 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 WDR1O75083 606 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 UGT2B11O75310 529 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 SPAG7O75391 227 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 ERN1O75460 977 aaKnown RBP12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 HPNP05981 417 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 CHRNGP07510 517 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 FGF4P08620 206 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 NEFHP12036 1026 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 COX6B1P14854 86 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 TACR1P25103 407 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 ELAVL4P26378 380 aaKnown RBP12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 CHRNB4P30926 498 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 PTGER4P35408 488 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 PTGDSP41222 190 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 MASP1P48740 699 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 CORO7P57737 925 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 NUP107P57740 925 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 PSPHP78330 225 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 PMPCAQ10713 525 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 SNTA1Q13424 505 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 UGT3A2Q3SY77 523 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 TIGD3Q6B0B8 471 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 DESI1Q6ICB0 168 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 SLC30A6Q6NXT4 461 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 B3GNT6Q6ZMB0 384 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 MCEMP1Q8IX19 187 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 TMBIM1Q969X1 311 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 SLC35A4Q96G79 324 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 EGLN2Q96KS0 407 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 FCRL1Q96LA6 429 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 GNRHR2Q96P88 292 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 TTYH2Q9BSA4 534 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 MECRQ9BV79 373 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 METTL7AQ9H8H3 244 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 FOLH1BQ9HBA9 442 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 LRTM1Q9HBL6 345 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 TAS2R9Q9NYW1 312 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 RNF6Q9Y252 685 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 FIS1Q9Y3D6 152 aa12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 PHF3Q92576 2039 aaKnown RBP12.5□□□□□ -0.41
AP001062.3-202ENST00000444409 A0A087WV62 115 aa12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 PLOD2O00469 737 aa12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 ABCB7O75027 752 aa12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 ICOSLGO75144 302 aa12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 NME6O75414 186 aaPredicted RBP12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 CHEK2O96017 543 aa12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 JUNP05412 331 aaKnown RBP12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 HOXD4P09016 255 aaPredicted RBP12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 GLI4P10075 376 aa12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 GABRA1P14867 456 aa12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 CREB1P16220 341 aa12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 PTPN6P29350 595 aa12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 NTSP30990 170 aa12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 MC3RP41968 323 aa12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 KIR3DL1P43629 444 aa12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 TRPC1P48995 793 aa12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 CDK9P50750 372 aaKnown RBP12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 NCBP2P52298 156 aaKnown RBP eCLIP12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 ARL13AQ5H913 290 aaPredicted RBP12.49□□□□□ -0.41
AP001062.3-202ENST00000444409 NPSR1Q6W5P4 371 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms