RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 CHCHD2Q9Y6H1 151 aaPredicted RBP13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 USH1CQ9Y6N9 552 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 EMC8O43402 210 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 ABCB7O75027 752 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 PPM1BO75688 479 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 ABCB1P08183 1280 aaPredicted RBP13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 CCL3P10147 92 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 PSG6Q00889 435 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 PMP22Q01453 160 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 KCNC4Q03721 635 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 ELOAQ14241 798 aaKnown RBP13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 ZNHIT3Q15649 155 aaPredicted RBP13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 ZCCHC12Q6PEW1 402 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 EPGNQ6UW88 154 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 GK5Q6ZS86 529 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 NUP54Q7Z3B4 507 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 CPSF7Q8N684 471 aaKnown RBP13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 FAM13CQ8NE31 585 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 OR2M7Q8NG81 312 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 HOXB13Q92826 284 aaPredicted RBP13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 LMF2Q9BU23 707 aaKnown RBP13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 WDR55Q9H6Y2 383 aaPredicted RBP13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 NEUROD4Q9HD90 331 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 SLCO1B3Q9NPD5 702 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 DEPPQ9NTK1 212 aa13.84□□□□□ -0.19
CSNK1E-210ENST00000442216 RP1L1Q8IWN7 2480 aaPredicted RBP13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 GOLGA8QA0A0J9YX86 632 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 GOLGA8OA6NCC3 632 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 ANKUB1A6NFN9 424 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 OR6C70A6NIJ9 312 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 GOLGA8NF8WBI6 632 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 RNASET2O00584 256 aaKnown RBP13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 ALDOCP09972 364 aaKnown RBP13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 IDO1P14902 403 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 ZNF24P17028 368 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 MST1P26927 711 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 CDK9P50750 372 aaKnown RBP13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 GPR85P60893 370 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 PRR5P85299 388 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 PLCXD2Q0VAA5 305 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 ZNF155Q12901 538 aaPredicted RBP13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 GSTA3Q16772 222 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 HYAL4Q2M3T9 481 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 CYP27C1Q4G0S4 372 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 SLC9B1Q4ZJI4 515 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 TMEM64Q6YI46 380 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 FAM47EQ6ZV65 393 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 MAVSQ7Z434 540 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 SIAH3Q8IW03 269 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 NUP43Q8NFH3 380 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 OR10G3Q8NGC4 313 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 SPPL2AQ8TCT8 520 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 STON2Q8WXE9 905 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 MOAP1Q96BY2 351 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 OMA1Q96E52 524 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 SLC35A4Q96G79 324 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 MS4A4EQ96PG1 132 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 CLMPQ9H6B4 373 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 SIRT3Q9NTG7 399 aaPredicted RBP13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 CNOT11Q9UKZ1 510 aaKnown RBP13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 GPR45Q9Y5Y3 372 aa13.83□□□□□ -0.2
CSNK1E-210ENST00000442216 PYCARD-AS1I3L0S3 204 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 ACOT7O00154 380 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 SOX30O94993 753 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 GNLYP22749 145 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 MAP3K8P41279 467 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 KIR3DL1P43629 444 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 PNLIPRP2P54317 469 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 CORO7P57737 925 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 FBXW4P57775 412 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 MRPS22P82650 360 aaKnown RBP13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 SNTA1Q13424 505 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 NNATQ16517 81 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 VPS26BQ4G0F5 336 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 PDCD4Q53EL6 469 aaKnown RBP13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 ANXA8L1Q5VT79 327 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 NXNQ6DKJ4 435 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 NPSR1Q6W5P4 371 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 ACAD11Q709F0 780 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 SLC44A2Q8IWA5 706 aaPredicted RBP13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 CDRT4Q8N9R6 151 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 GLB1L3Q8NCI6 653 aaPredicted RBP13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 VPS37AQ8NEZ2 397 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 SFXN5Q8TD22 340 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 HGDQ93099 445 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 NTNG2Q96CW9 530 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 MAGED4Q96JG8 741 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 GPR137Q96N19 417 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 IL1RL2Q9HB29 575 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 Q9N2J8 555 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 GIN1Q9NXP7 522 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 MRTO4Q9UKD2 239 aaKnown RBP13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 FREM3P0C091 2139 aa13.82□□□□□ -0.2
CSNK1E-210ENST00000442216 POLEQ07864 2286 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 PRSS51A0A1B0GVH4 220 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 E9PBE3 544 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 UBDO15205 165 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 TSPAN2O60636 221 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 DIAPH2O60879 1101 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms