RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 MAT2BQ9NZL9 334 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 SUSD2Q9UGT4 822 aa12.33□□□□□ -0.44
CPSF4-206ENST00000441580 MN1Q10571 1320 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-206ENST00000441580 FITM1A5D6W6 292 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 H0YIG0 161 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 M0R3H8 397 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 CHST10O43529 356 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 SDC3O75056 442 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 FAM20BO75063 409 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 ACP2P11117 423 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 GNSP15586 552 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 POLR2IP36954 125 aaKnown RBP12.32□□□□□ -0.44
CPSF4-206ENST00000441580 CTSKP43235 329 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 GPR3P46089 330 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 ARRB1P49407 418 aaPredicted RBP12.32□□□□□ -0.44
CPSF4-206ENST00000441580 CSNK1EP49674 416 aaKnown RBP12.32□□□□□ -0.44
CPSF4-206ENST00000441580 CDC42P60953 191 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 IGLV3-21P80748 117 aaPredicted RBP12.32□□□□□ -0.44
CPSF4-206ENST00000441580 ZNF155Q12901 538 aaPredicted RBP12.32□□□□□ -0.44
CPSF4-206ENST00000441580 GRM7Q14831 915 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 LARS2Q15031 903 aaKnown RBP12.32□□□□□ -0.44
CPSF4-206ENST00000441580 PRICKLE4Q2TBC4 344 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 ZNF770Q6IQ21 691 aaPredicted RBP12.32□□□□□ -0.44
CPSF4-206ENST00000441580 FRRS1Q6ZNA5 592 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 GALNT12Q8IXK2 581 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 VWA5B2Q8N398 1253 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 DEFB123Q8N688 67 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 C7orf57Q8NEG2 295 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 OR9A4Q8NGU2 314 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 CNIH3Q8TBE1 160 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 FAM81AQ8TBF8 368 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 SLC9A6Q92581 669 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 CDS1Q92903 461 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 ZNF578Q96N58 590 aaPredicted RBP12.32□□□□□ -0.44
CPSF4-206ENST00000441580 TGM7Q96PF1 710 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 NODALQ96S42 347 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 NIPSNAP1Q9BPW8 284 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 ADAP2Q9NPF8 381 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 PRMT8Q9NR22 394 aaPredicted RBP12.32□□□□□ -0.44
CPSF4-206ENST00000441580 IMPAD1Q9NX62 359 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 A4GNTQ9UNA3 340 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 ZNF443Q9Y2A4 671 aaPredicted RBP12.32□□□□□ -0.44
CPSF4-206ENST00000441580 WDR45Q9Y484 360 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 RNF215Q9Y6U7 377 aa12.32□□□□□ -0.44
CPSF4-206ENST00000441580 TDRD6O60522 2096 aaKnown RBP12.31□□□□□ -0.44
CPSF4-206ENST00000441580 A0A0A6YYC8 382 aaPredicted RBP12.31□□□□□ -0.44
CPSF4-206ENST00000441580 TRBV4-1A0A0J9YWV2 114 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 TTC36A6NLP5 189 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 I3L1I5 382 aaPredicted RBP12.31□□□□□ -0.44
CPSF4-206ENST00000441580 CLDN4O14493 209 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 FFAR1O14842 300 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 PCDH17O14917 1159 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 YKT6O15498 198 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 KIAA0513O60268 411 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 OR10H3O60404 316 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 LDB3O75112 727 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 DCNP07585 359 aaKnown RBP12.31□□□□□ -0.44
CPSF4-206ENST00000441580 GUSBP08236 651 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 ITIH1P19827 911 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 AGXTP21549 392 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 RPS4Y1P22090 263 aaKnown RBP12.31□□□□□ -0.44
CPSF4-206ENST00000441580 DCKP27707 260 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 KRT20P35900 424 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 IFNGR2P38484 337 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 PDX1P52945 283 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 GFERP55789 205 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 RGS8P57771 180 aaPredicted RBP12.31□□□□□ -0.44
CPSF4-206ENST00000441580 ID2Q02363 134 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 CHRNEQ04844 493 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 RAB39AQ14964 217 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 ZNHIT3Q15649 155 aaPredicted RBP12.31□□□□□ -0.44
CPSF4-206ENST00000441580 NEDD8Q15843 81 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 DUSP5Q16690 384 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 DCST2Q5T1A1 773 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 MLIPQ5VWP3 458 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 LAIR2Q6ISS4 152 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 PRSS42Q7Z5A4 293 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 WDR5BQ86VZ2 330 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 KMT5CQ86Y97 462 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 PLXDC1Q8IUK5 500 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 LACC1Q8IV20 430 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 P3H2Q8IVL5 708 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 OR4N5Q8IXE1 308 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 ZNF619Q8N2I2 560 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 COX18Q8N8Q8 333 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 SLC16A11Q8NCK7 471 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 TMEM52Q8NDY8 209 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 BPIFB6Q8NFQ5 453 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 TOR1AIP2Q8NFQ8 470 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 OR52P1PQ8NH57 321 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 HOXB13Q92826 284 aaPredicted RBP12.31□□□□□ -0.44
CPSF4-206ENST00000441580 ANKRD9Q96BM1 317 aaPredicted RBP12.31□□□□□ -0.44
CPSF4-206ENST00000441580 CTHRC1Q96CG8 243 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 MVB12AQ96EY5 273 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 SLC35A4Q96G79 324 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 FUZQ9BT04 418 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 UCK2Q9BZX2 261 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 STARD5Q9NSY2 213 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 TMEM74BQ9NUR3 256 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 RLIMQ9NVW2 624 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms