RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 CHMP1BQ7LBR1 199 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 OLIG3Q7RTU3 272 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 IQCHQ86VS3 1027 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 ARIH2OSQ8N7S6 290 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 ZBTB44Q8NCP5 570 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 OR4F15Q8NGB8 312 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 TEFMQ96QE5 360 aaKnown RBP19.14■□□□□ 0.65
SHOX2-203ENST00000441443 RBP7Q96R05 134 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 PRR14Q9BWN1 585 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 SORBS1Q9BX66 1292 aaKnown RBP19.14■□□□□ 0.65
SHOX2-203ENST00000441443 SLC6A16Q9GZN6 736 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 SAP130Q9H0E3 1048 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 EMC7Q9NPA0 242 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 FBXO9Q9UK97 447 aaPredicted RBP19.14■□□□□ 0.65
SHOX2-203ENST00000441443 OR51B4Q9Y5P0 310 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 PREPP48147 710 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 RPL6Q02878 288 aaKnown RBP19.14■□□□□ 0.65
SHOX2-203ENST00000441443 BTN1A1Q13410 526 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 HSD17B8Q92506 261 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 OTUB1Q96FW1 271 aaPredicted RBP19.14■□□□□ 0.65
SHOX2-203ENST00000441443 SCMH1Q96GD3 660 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 OR51J1Q9H342 316 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 RDH8Q9NYR8 311 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 UBQLN2Q9UHD9 624 aa19.14■□□□□ 0.65
SHOX2-203ENST00000441443 MYOFQ9NZM1 2061 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 IFNA7P01567 189 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 HRGP04196 525 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 RAB40BQ12829 278 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 COMTD1Q86VU5 262 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 CXorf40BQ96DE9 158 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 TOE1Q96GM8 510 aaKnown RBP19.13■□□□□ 0.65
SHOX2-203ENST00000441443 NLNQ9BYT8 704 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 MRPL39Q9NYK5 338 aaKnown RBP19.13■□□□□ 0.65
SHOX2-203ENST00000441443 PHF11Q9UIL8 331 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 ADAM30Q9UKF2 790 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 SLC16A5O15375 505 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 SGTAO43765 313 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 HOXD4P09016 255 aaPredicted RBP19.13■□□□□ 0.65
SHOX2-203ENST00000441443 MAP2K6P52564 334 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 VSX2P58304 361 aaPredicted RBP19.13■□□□□ 0.65
SHOX2-203ENST00000441443 CRYZQ08257 329 aaKnown RBP19.13■□□□□ 0.65
SHOX2-203ENST00000441443 MAP4K2Q12851 820 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 CLLU1Q5K131 121 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 LSRQ86X29 649 aaPredicted RBP19.13■□□□□ 0.65
SHOX2-203ENST00000441443 OR4K5Q8NGD3 323 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 ZNF296Q8WUU4 475 aaPredicted RBP19.13■□□□□ 0.65
SHOX2-203ENST00000441443 PDXPQ96GD0 296 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 METTL2AQ96IZ6 378 aaKnown RBP19.13■□□□□ 0.65
SHOX2-203ENST00000441443 KCNN2Q9H2S1 579 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 BEX1Q9HBH7 125 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 CKAP5Q14008 2032 aa19.13■□□□□ 0.65
SHOX2-203ENST00000441443 KLHL18O94889 574 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 IL3P08700 152 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 RRASP10301 218 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 PTBP1P26599 531 aaKnown RBP eCLIP19.12■□□□□ 0.65
SHOX2-203ENST00000441443 CLEC12AQ5QGZ9 265 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 PLEKHS1Q5SXH7 462 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 MED27Q6P2C8 311 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 ZFR2Q9UPR6 939 aaKnown RBP19.12■□□□□ 0.65
SHOX2-203ENST00000441443 SH2B3Q9UQQ2 575 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 CACNG2Q9Y698 323 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 TEX13CA0A0J9YWL9 993 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 H3BUI4 141 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 PRODHO43272 600 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 HLA-DPB1P04440 258 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 SLC1A3P43003 542 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 SLC6A11P48066 632 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 SMSP52788 366 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 TLE2Q04725 743 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 KIAA0907Q7Z7F0 614 aaPredicted RBP19.12■□□□□ 0.65
SHOX2-203ENST00000441443 GPR135Q8IZ08 494 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 FGF11Q92914 225 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 ALG14Q96F25 216 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 RNF208Q9H0X6 261 aa19.12■□□□□ 0.65
SHOX2-203ENST00000441443 FGF20Q9NP95 211 aaPredicted RBP19.12■□□□□ 0.65
SHOX2-203ENST00000441443 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.11■□□□□ 0.65
SHOX2-203ENST00000441443 C7orf66A4D0T2 115 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 ANHXE9PGG2 379 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 SERPINI2O75830 405 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 CH25HO95992 272 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 EIF4EP06730 217 aaKnown RBP19.11■□□□□ 0.65
SHOX2-203ENST00000441443 GABRR2P28476 465 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 RAB14P61106 215 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 PDE7AQ13946 482 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 GPALPP1Q8IXQ4 340 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 SCAMP4Q969E2 229 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 RBCK1Q9BYM8 510 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 MIEF1Q9NQG6 463 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 CUEDC1Q9NWM3 386 aaPredicted RBP19.11■□□□□ 0.65
SHOX2-203ENST00000441443 SEC14L3Q9UDX4 400 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 A4GNTQ9UNA3 340 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 IGLV3-16A0A075B6K0 115 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 SLC19A2O60779 497 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 DNASE1P24855 282 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 IMPA1P29218 277 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 COX10Q12887 443 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 ZMYND11Q15326 602 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 GARNL3Q5VVW2 1013 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 FAM71E1Q6IPT2 247 aa19.11■□□□□ 0.65
SHOX2-203ENST00000441443 TMEM81Q6P7N7 255 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms