RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TLX2O43763 284 aaPredicted RBP11.24□□□□□ -0.61
LTBR-203ENST00000441074 MPC2O95563 127 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 HSD3B1P14060 373 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 ITPKAP23677 461 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 HSD3B2P26439 372 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 HBA1P69905 142 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 IRF8Q02556 426 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 SEC23BQ15437 767 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 DUSP6Q16828 381 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 SYT14P1Q58G82 188 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 OR2G6Q5TZ20 316 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 ZDHHC20Q5W0Z9 365 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 TMEM81Q6P7N7 255 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 HTR3DQ70Z44 454 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 OR10Z1Q8NGY1 313 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 SORCS1Q8WY21 1168 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 CXorf40BQ96DE9 158 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 RBP7Q96R05 134 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 MTERF1Q99551 399 aaKnown RBP11.24□□□□□ -0.61
LTBR-203ENST00000441074 FGF20Q9NP95 211 aaPredicted RBP11.24□□□□□ -0.61
LTBR-203ENST00000441074 MRPS18AQ9NVS2 196 aaKnown RBP11.24□□□□□ -0.61
LTBR-203ENST00000441074 TVP23BQ9NYZ1 205 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 ANGPT4Q9Y264 503 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 WNT6Q9Y6F9 365 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 IGLV3-16A0A075B6K0 115 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 FAAHO00519 579 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 KHNYNO15037 678 aaKnown RBP11.23□□□□□ -0.61
LTBR-203ENST00000441074 LRRTM2O43300 516 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 NDUFA2O43678 99 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 PRKYO43930 277 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 PPM1BO75688 479 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 IGSF6O95976 241 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 RB1P06400 928 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 ARAFP10398 606 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 GLULP15104 373 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 CD22P20273 847 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 GAS1P54826 345 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 LIM2P55344 173 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 SLC7A9P82251 487 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 GPM6BQ13491 265 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 PUM1Q14671 1186 aaKnown RBP eCLIP11.23□□□□□ -0.61
LTBR-203ENST00000441074 CCDC85BQ15834 202 aaPredicted RBP11.23□□□□□ -0.61
LTBR-203ENST00000441074 LRRC73Q5JTD7 316 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 DCST1Q5T197 706 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 RTL4Q6ZR62 310 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 OR7G3Q8NG95 312 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 ASB11Q8WXH4 323 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 GATAD2BQ8WXI9 593 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 KLHL15Q96M94 604 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 ZNF582Q96NG8 517 aaPredicted RBP11.23□□□□□ -0.61
LTBR-203ENST00000441074 OR2M2Q96R28 347 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 UBL7Q96S82 380 aaPredicted RBP11.23□□□□□ -0.61
LTBR-203ENST00000441074 PKP4Q99569 1192 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 P2RY13Q9BPV8 354 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 GSX2Q9BZM3 304 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 TTYH1Q9H313 450 aaPredicted RBP11.23□□□□□ -0.61
LTBR-203ENST00000441074 OR51J1Q9H342 316 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 ATP6V1HQ9UI12 483 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 LSM7Q9UK45 103 aaKnown RBP11.23□□□□□ -0.61
LTBR-203ENST00000441074 SCML1Q9UN30 329 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 CSNK1G3Q9Y6M4 447 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 A0A1B0GVI7 797 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 IRGMA1A4Y4 181 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 C5orf67F2Z3F1 127 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 SH3BP5O60239 455 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 OR10H3O60404 316 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 CEBPBP17676 345 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 ELAVL4P26378 380 aaKnown RBP11.23□□□□□ -0.61
LTBR-203ENST00000441074 SERPINA4P29622 427 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 CCR7P32248 378 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 VIPR2P41587 438 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 ZNF81P51508 661 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 EPHA5P54756 1037 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 MESP2Q0VG99 397 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 DBPQ10586 325 aaPredicted RBP11.23□□□□□ -0.61
LTBR-203ENST00000441074 DDX39BQ13838 428 aaKnown RBP11.23□□□□□ -0.61
LTBR-203ENST00000441074 ARHGAP15Q53QZ3 475 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 ZNF385BQ569K4 471 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 SPIN4Q56A73 249 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 PLEKHS1Q5SXH7 462 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 USP45Q70EL2 814 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 SLC30A8Q8IWU4 369 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 ZBTB44Q8NCP5 570 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 APOBEC4Q8WW27 367 aaKnown RBP11.23□□□□□ -0.61
LTBR-203ENST00000441074 OTULINQ96BN8 352 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 CHFRQ96EP1 664 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 SLC7A5P2Q9GIP4 190 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 TDP1Q9NUW8 608 aa11.23□□□□□ -0.61
LTBR-203ENST00000441074 LYARQ9NX58 379 aaKnown RBP11.23□□□□□ -0.61
LTBR-203ENST00000441074 ANTXRLA6NF34 631 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 KPNA5O15131 536 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 NCR1O76036 304 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 C6orf47O95873 294 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 PAHP00439 452 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 ZP3P21754 424 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 NNMTP40261 264 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 MAP2K6P52564 334 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 PFN3P60673 137 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 PUDPQ08623 228 aa11.22□□□□□ -0.61
LTBR-203ENST00000441074 RAB40BQ12829 278 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms