RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 OR2A14Q96R47 310 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 PHF7Q9BWX1 381 aaPredicted RBP13.33□□□□□ -0.27
LIMD1-202ENST00000440097 SYNPO2LQ9H987 977 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 ENTPD4Q9Y227 616 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 NCOR1O75376 2440 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 TNFRSF11BO00300 401 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 C9P02748 559 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 SEMG1P04279 462 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 THEGLP0DJG4 465 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 ARAFP10398 606 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 GLULP15104 373 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 NUDT6P53370 316 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 CDH12P55289 794 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 PCBP4P57723 403 aaKnown RBP13.33□□□□□ -0.28
LIMD1-202ENST00000440097 RGS1Q08116 209 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 TGM3Q08188 693 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 C18orf63Q68DL7 685 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 CYP4Z2PQ8N1L4 340 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 MFSD9Q8NBP5 474 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 TSTD1Q8NFU3 115 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 GGHQ92820 318 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 YIPF4Q9BSR8 244 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 GLIPR2Q9H4G4 154 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 UBE2ZQ9H832 354 aaPredicted RBP13.33□□□□□ -0.28
LIMD1-202ENST00000440097 PRDM7Q9NQW5 492 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 C2orf42Q9NWW7 574 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 NDUFAF4Q9P032 175 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 GRIP1Q9Y3R0 1128 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 TTC28Q96AY4 2481 aa13.33□□□□□ -0.28
LIMD1-202ENST00000440097 TDRD6O60522 2096 aaKnown RBP13.33□□□□□ -0.28
LIMD1-202ENST00000440097 A0A1W2PR48 441 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 CYP7B1O75881 506 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 CDK1P06493 297 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 HSMCR30P0CW71 290 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 GSTM5P46439 218 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 PXNP49023 591 aaPredicted RBP13.32□□□□□ -0.28
LIMD1-202ENST00000440097 TRA2BP62995 288 aaKnown RBP13.32□□□□□ -0.28
LIMD1-202ENST00000440097 SMAD4Q13485 552 aaKnown RBP13.32□□□□□ -0.28
LIMD1-202ENST00000440097 ZIC1Q15915 447 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 Q5BKY6 102 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 ARMCX4Q5H9R4 360 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 SAXO2Q658L1 398 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 KIAA0895LQ68EN5 471 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 SIGIRRQ6IA17 410 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 ZNF425Q6IV72 752 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 NRROSQ86YC3 692 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 OR5D16Q8NGK9 328 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 SLC38A5Q8WUX1 472 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 MYDGFQ969H8 173 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 TMEM19Q96HH6 336 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 CEP19Q96LK0 163 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 PHOX2BQ99453 314 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 IRF2BPLQ9H1B7 796 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 USP36Q9P275 1121 aaKnown RBP13.32□□□□□ -0.28
LIMD1-202ENST00000440097 APOBEC3BQ9UH17 382 aaKnown RBP13.32□□□□□ -0.28
LIMD1-202ENST00000440097 PCOLCE2Q9UKZ9 415 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 PADI2Q9Y2J8 665 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 PCDHGB3Q9Y5G1 929 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 PCDHGA2Q9Y5H1 932 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 HS3ST3A1Q9Y663 406 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 NINQ8N4C6 2090 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 SHISA7A6NL88 538 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 ADAMDEC1O15204 470 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 SLC28A2O43868 658 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 AIFM1O95831 613 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 PTHP01270 115 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 CELA2BP08218 269 aaPredicted RBP13.32□□□□□ -0.28
LIMD1-202ENST00000440097 ZNF888P0CJ79 500 aaPredicted RBP13.32□□□□□ -0.28
LIMD1-202ENST00000440097 SRFP11831 508 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 UGT2B7P16662 529 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 SOX6P35712 828 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 RPS15AP62244 130 aaKnown RBP13.32□□□□□ -0.28
LIMD1-202ENST00000440097 CSNK2BP67870 215 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 TDGQ13569 410 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 IRF3Q14653 427 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 GANABQ14697 944 aaKnown RBP13.32□□□□□ -0.28
LIMD1-202ENST00000440097 COL19A1Q14993 1142 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 UBXN2BQ14CS0 331 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 IQCCQ4KMZ1 466 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 PRR23CQ6ZRP0 262 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 TSEN54Q7Z6J9 526 aaKnown RBP13.32□□□□□ -0.28
LIMD1-202ENST00000440097 ASPGQ86U10 573 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 RAB43Q86YS6 212 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 DNAJC22Q8N4W6 341 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 AMDHD1Q96NU7 426 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 SLC30A2Q9BRI3 323 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 CCDC32Q9BV29 185 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 GSDMCQ9BYG8 508 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 LMAN1LQ9HAT1 526 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 SIRT3Q9NTG7 399 aaPredicted RBP13.32□□□□□ -0.28
LIMD1-202ENST00000440097 ACSS1Q9NUB1 689 aaPredicted RBP13.32□□□□□ -0.28
LIMD1-202ENST00000440097 GPR83Q9NYM4 423 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 CPNE7Q9UBL6 633 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 FANCMQ8IYD8 2048 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 J3KTA2 159 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 ARHGAP33O14559 1287 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 KIAA0513O60268 411 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 CRYZL1O95825 349 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 STSP08842 583 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 ADORA3P0DMS8 318 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms