RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 TRPC4Q9UBN4 977 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 SF3B6Q9Y3B4 125 aaKnown RBP15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 A0A1W2PQL4 384 aaPredicted RBP15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 IRGMA1A4Y4 181 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 CHRM4P08173 479 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 CSF3P09919 207 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 TSPAN19P0C672 248 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 DRD2P14416 443 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 GSTM3P21266 225 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 RPS25P62851 125 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 LSM11P83369 360 aaKnown RBP eCLIP15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 FUT5Q11128 374 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 RAB40BQ12829 278 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 TPBGQ13641 420 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 HNRNPA1L2Q32P51 320 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 ZFP69Q49AA0 526 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 QSOX2Q6ZRP7 698 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 OLIG3Q7RTU3 272 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 SZRD1Q7Z422 152 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 GATAD2AQ86YP4 633 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 PLA2G15Q8NCC3 412 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 TMEM163Q8TC26 289 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 TM9SF4Q92544 642 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 CHFRQ96EP1 664 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 KCTD7Q96MP8 289 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 SPATA5L1Q9BVQ7 753 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 YIPF2Q9BWQ6 316 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 PLA2G12AQ9BZM1 189 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 ZCCHC3Q9NUD5 404 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 DDX28Q9NUL7 540 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 SNX7Q9UNH6 387 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 CARD8Q9Y2G2 431 aa15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 YARS2Q9Y2Z4 477 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-203ENST00000439316 EDDM13A0A1B0GTR0 161 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 TBC1D3BA6NDS4 549 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 PRODHO43272 600 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 NR2F6P10588 404 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 GPC1P35052 558 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 MAN2A2P49641 1150 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 SNAPC1Q16533 368 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 FNDC3BQ53EP0 1204 aaKnown RBP15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 DDI2Q5TDH0 399 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 OR4C11Q6IEV9 310 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 ADAMTSL4Q6UY14 1074 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 SLC36A4Q6YBV0 504 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 SMRP1Q8NCR6 262 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 TMEM203Q969S6 136 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 DPH7Q9BTV6 452 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 TRMT61BQ9BVS5 477 aaKnown RBP15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 ANTXRLA6NF34 631 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 CASC3O15234 703 aaKnown RBP15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 OR1F1O43749 312 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 SDC2P34741 201 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 SLAMF1Q13291 335 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 ELAVL3Q14576 367 aaKnown RBP15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 TBRG1Q3YBR2 411 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 NDUFAF5Q5TEU4 345 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 OR2G6Q5TZ20 316 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 FAM46CQ5VWP2 391 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 TMEM64Q6YI46 380 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 RDH10Q8IZV5 341 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 SUN3Q8TAQ9 357 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 RNFT2Q96EX2 444 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 KATNB1Q9BVA0 655 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 AICDAQ9GZX7 198 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 MMP28Q9H239 520 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 MARCH7Q9H992 704 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 ZDHHC4Q9NPG8 344 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 SLC35C2Q9NQQ7 365 aa15.42■□□□□ 0.06
CLCNKA-203ENST00000439316 FABP12A6NFH5 140 aa15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 POLR1CO15160 346 aaPredicted RBP15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 CLEC3AO75596 197 aa15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 NCBP2P52298 156 aaKnown RBP eCLIP15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 CSNK1G2P78368 415 aa15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 MINDY4Q4G0A6 757 aa15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 ZNF628Q5EBL2 1059 aa15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 METRNLQ641Q3 311 aa15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 LRRTM4Q86VH4 590 aa15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 VWA5B2Q8N398 1253 aa15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 SFXN5Q8TD22 340 aa15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 UFD1Q92890 307 aa15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 DIRAS2Q96HU8 199 aa15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 C11orf54Q9H0W9 315 aaPredicted RBP15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 EGLN3Q9H6Z9 239 aa15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 TM7SF3Q9NS93 570 aa15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 EXOSC1Q9Y3B2 195 aaKnown RBP15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 TICRRQ7Z2Z1 1910 aa15.41■□□□□ 0.06
CLCNKA-203ENST00000439316 A0A0G2JN53 185 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 LINC00854A0A1B0GVQ3 168 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 CENPXA8MT69 81 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 KDM4EB2RXH2 506 aaPredicted RBP15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 SLC30A4O14863 429 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 PPM1DO15297 605 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 LCMT2O60294 686 aaKnown RBP15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 UBXN7O94888 489 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 NTSP30990 170 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 GABRA5P31644 462 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 SSR2P43308 183 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 ZNF234Q14588 700 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms