RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ODF2Q5BJF6 829 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 ZNF789Q5FWF6 425 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 ZNF343Q6P1L6 599 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 GDPGP1Q6ZNW5 385 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 ERC1Q8IUD2 1116 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 SIAH3Q8IW03 269 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 LAX1Q8IWV1 398 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 UNC45BQ8IWX7 931 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 SPAG16Q8N0X2 631 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 SFRP1Q8N474 314 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 CLEC1AQ8NC01 280 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 LPCAT1Q8NF37 534 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 OR5M9Q8NGP3 310 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 ULK4Q96C45 1275 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 EPSTI1Q96J88 318 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 CFAP53Q96M91 514 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 PRICKLE1Q96MT3 831 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 ZNF665Q9H7R5 613 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 PANK3Q9H999 370 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 AKIRIN1Q9H9L7 192 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 UBE2TQ9NPD8 197 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 MTRRQ9UBK8 725 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 KLK11Q9UBX7 282 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 PILRAQ9UKJ1 303 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 WIPI2Q9Y4P8 454 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 DSPP15924 2871 aaKnown RBP2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 NBEAQ8NFP9 2946 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 ITPR1Q14643 2758 aa2.71□□□□□ -1.98
HMGB3P12-201ENST00000438745 CFAP46Q8IYW2 2715 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 ASTN1O14525 1302 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 FRMPD4Q14CM0 1322 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 RAD50Q92878 1312 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 NKX6-3A6NJ46 265 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 K7EQD1 137 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 CACNB4O00305 520 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 TFECO14948 347 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 PSMD3O43242 534 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 SYT7O43581 403 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 ODC1P11926 461 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 ACKR3P25106 362 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 ADSSP30520 456 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 CLCN4P51793 760 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 PEX3P56589 373 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 ELAVL2Q12926 359 aaKnown RBP2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 LCP2Q13094 533 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 SRSF5Q13243 272 aaKnown RBP2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 PPP2R5CQ13362 524 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 GPR50Q13585 617 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 ENPP2Q13822 863 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 GCKRQ14397 625 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 GPNMBQ14956 572 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 SGCBQ16585 318 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 SHROOM1Q2M3G4 852 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 ZNF776Q68DI1 518 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 KCTD11Q693B1 232 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 TMEM184AQ6ZMB5 413 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 ELMOD1Q8N336 334 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 TMEM99Q8N816 258 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 FAM133AQ8N9E0 248 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 SPC24Q8NBT2 197 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 CCDC197Q8NCU1 140 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 MSANTD4Q8NCY6 345 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 TRPV3Q8NET8 790 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 RNASE8Q8TDE3 154 aaKnown RBP2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 SNX21Q969T3 373 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 LURAP1Q96LR2 239 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 ERGIC2Q96RQ1 377 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 DDX50Q9BQ39 737 aaKnown RBP2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 NTMT1Q9BV86 223 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 LRRC61Q9BV99 259 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 LRRC2Q9BYS8 371 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 NAPBQ9H115 298 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 PLEKHA3Q9HB20 300 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 IL1RAPQ9NPH3 570 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 TMEM9BQ9NQ34 198 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 PRMT8Q9NR22 394 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 NDE1Q9NXR1 346 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 ZNF319Q9P2F9 582 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 Q9Y3F1 56 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 OR1A2Q9Y585 309 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 NOTCH2Q04721 2471 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 TICRRQ7Z2Z1 1910 aa2.7□□□□□ -1.98
HMGB3P12-201ENST00000438745 FBN2P35556 2912 aa2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 FRYLO94915 3013 aa2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 LOC400499M0QZD8 3231 aa2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 LOC105371242A0A075B767 164 aa2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 IGHV3OR16-10A0A075B7F0 116 aa2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 FAM149AA5PLN7 773 aa2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 ASB14A6NK59 587 aa2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 RSPH10B2B2RC85 870 aa2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 RRP8O43159 456 aaKnown RBP2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 MTRF1O75570 445 aaKnown RBP2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 NXPH4O95158 308 aa2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 POP4O95707 220 aaKnown RBP2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 ANGPTL1O95841 491 aa2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 RSPH10BP0C881 870 aa2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 THEGLP0DJG4 465 aa2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 ADORA3P0DMS8 318 aa2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 CCDC192P0DO97 292 aa2.69□□□□□ -1.98
HMGB3P12-201ENST00000438745 ID1P41134 155 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms