RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 POMZP3Q6PJE2 187 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 BTLAQ7Z6A9 289 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 PTOV1Q86YD1 416 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 CPOQ8IVL8 374 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 SLC44A3Q8N4M1 653 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF676Q8N7Q3 588 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 OR2A12Q8NGT7 310 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 RPLP0P6Q8NHW5 317 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 MYLIPQ8WY64 445 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 WBP2Q969T9 261 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 TM9SF2Q99805 663 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 CACNG6Q9BXT2 260 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 GABARAPL3Q9BY60 117 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 TTTY10Q9BZA0 68 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 TAS2R10Q9NYW0 307 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 MED11Q9P086 117 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 GNG8Q9UK08 70 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 MRTO4Q9UKD2 239 aaKnown RBP6.33□□□□□ -1.4
CSDE1-205ENST00000438362 NEU3Q9UQ49 428 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 MED16Q9Y2X0 877 aa6.33□□□□□ -1.4
CSDE1-205ENST00000438362 A0A1W2PRQ8 180 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 MCIDASD6RGH6 385 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF670-ZNF695F2Z2N8 137 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 FAM227AF5H4B4 570 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 FRS3O43559 492 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 DNASE1P24855 282 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 LCN1P31025 176 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 SEC13P55735 322 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ACTC1P68032 377 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ACTA1P68133 377 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 SNTB2Q13425 540 aaKnown RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 SF3A2Q15428 464 aaKnown RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 CCSMST1Q4G0I0 132 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 OR2G6Q5TZ20 316 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 MLIPQ5VWP3 458 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 FAHD1Q6P587 224 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 PARS2Q7L3T8 475 aaKnown RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 Q8N9G6 341 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 SYT14Q8NB59 555 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF740Q8NDX6 193 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 PXYLP1Q8TE99 480 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ZSWIM3Q96MP5 696 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 LYSMD1Q96S90 227 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 CSF3RQ99062 836 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 PITX2Q99697 317 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 LGR4Q9BXB1 951 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 PINK1Q9BXM7 581 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF717Q9BY31 904 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 RNF167Q9H6Y7 350 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 SLC6A13Q9NSD5 602 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 SPATA6Q9NWH7 488 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 FBXL12Q9NXK8 326 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 RDH8Q9NYR8 311 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 BAIAP2Q9UQB8 552 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 RWDD3Q9Y3V2 267 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ASB4Q9Y574 426 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 MYO7AQ13402 2215 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 A0A1W2PRG6 482 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 IGLON5A6NGN9 336 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ELOA3DA6NLF2 546 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 L7N2F9 121 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 WWP2O00308 870 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 TSPAN4O14817 238 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 RPP14O95059 124 aaKnown RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 CD2P06729 351 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 CTSAP10619 480 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 MAGEA2P43356 314 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 RPL6Q02878 288 aaKnown RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ARHGAP19Q14CB8 494 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 TATDN3Q17R31 274 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ELOA3BQ3SY89 546 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 PDZD3Q86UT5 571 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 MEX3DQ86XN8 651 aaKnown RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 LRRC25Q8N386 305 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 MS4A15Q8N5U1 240 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 LILRA3Q8N6C8 439 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ELOA3Q8NG57 546 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ADAMTS19Q8TE59 1207 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 HERVK_113Q902F9 699 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 COQ8BQ96D53 544 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 CXorf36Q9H7Y0 433 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 NPAP1Q9NZP6 1156 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 OSGIN1Q9UJX0 560 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 CSNK1G3Q9Y6M4 447 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 A0A1W2PPK0 400 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 FAM25EA8MYX2 175 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 UPK1AO00322 258 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 COQ9O75208 318 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ACP2P11117 423 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 SLC19A1P41440 591 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 MAN2A2P49641 1150 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 OR12D2P58182 307 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 TSPAN5P62079 268 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 CDC20Q12834 499 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 SF3B4Q15427 424 aaKnown RBP eCLIP6.32□□□□□ -1.43e-8■■■□□ 18.4
CSDE1-205ENST00000438362 GPR19Q15760 415 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 DEFB134Q4QY38 66 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 C2orf27AQ580R0 203 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 SLX4IPQ5VYV7 408 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms