RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 GALNT9Q9HCQ5 603 aa4.05□□□□□ -1.76
HLA-N-201ENST00000437516 SLAMF7Q9NQ25 335 aa4.05□□□□□ -1.76
HLA-N-201ENST00000437516 WASH6PQ9NQA3 447 aa4.05□□□□□ -1.76
HLA-N-201ENST00000437516 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.05□□□□□ -1.76
HLA-N-201ENST00000437516 MED17Q9NVC6 651 aa4.05□□□□□ -1.76
HLA-N-201ENST00000437516 RNF186Q9NXI6 227 aa4.05□□□□□ -1.76
HLA-N-201ENST00000437516 PTTG3PQ9NZH4 202 aa4.05□□□□□ -1.76
HLA-N-201ENST00000437516 H2AFY2Q9P0M6 372 aaPredicted RBP4.05□□□□□ -1.76
HLA-N-201ENST00000437516 TRPC4Q9UBN4 977 aa4.05□□□□□ -1.76
HLA-N-201ENST00000437516 CBLCQ9ULV8 474 aa4.05□□□□□ -1.76
HLA-N-201ENST00000437516 ING4Q9UNL4 249 aa4.05□□□□□ -1.76
HLA-N-201ENST00000437516 GPR34Q9UPC5 381 aa4.05□□□□□ -1.76
HLA-N-201ENST00000437516 LIPT1Q9Y234 373 aa4.05□□□□□ -1.76
HLA-N-201ENST00000437516 YARS2Q9Y2Z4 477 aaKnown RBP4.05□□□□□ -1.76
HLA-N-201ENST00000437516 CLCA3PQ9Y6N3 262 aa4.05□□□□□ -1.76
HLA-N-201ENST00000437516 CDH10Q9Y6N8 788 aa4.05□□□□□ -1.76
HLA-N-201ENST00000437516 THSD7BQ9C0I4 1608 aa4.05□□□□□ -1.76
HLA-N-201ENST00000437516 NUP205Q92621 2012 aa4.05□□□□□ -1.76
HLA-N-201ENST00000437516 CROCCQ5TZA2 2017 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 COL4A6Q14031 1691 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 LOC102723532A0A0G2JNH3 316 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 A0A0X1KG70 313 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 LOC105371267A0A1B0GV96 52 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 A0A1W2PRU2 124 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 C7orf66A4D0T2 115 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 SMIM30A4D0T7 59 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 WASHC1A8K0Z3 465 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 ISM1B1AKI9 464 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 NEDD8-MDP1E9PL57 170 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 RTCAO00442 366 aaKnown RBP4.04□□□□□ -1.76
HLA-N-201ENST00000437516 SURF4O15260 269 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 NDUFS4O43181 175 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 LRRTM2O43300 516 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 TPD52L2O43399 206 aaKnown RBP4.04□□□□□ -1.76
HLA-N-201ENST00000437516 AKR7A2O43488 359 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 RNF13O43567 381 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 AKAP8O43823 692 aaKnown RBP4.04□□□□□ -1.76
HLA-N-201ENST00000437516 VEGFDO43915 354 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 PLOD3O60568 738 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 LILRB3O75022 631 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 CLEC3AO75596 197 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 RGS9O75916 674 aaPredicted RBP4.04□□□□□ -1.76
HLA-N-201ENST00000437516 TBX6O95947 436 aaPredicted RBP4.04□□□□□ -1.76
HLA-N-201ENST00000437516 LALBAP00709 142 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 IGHA1P01876 353 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 HMGN1P05114 100 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 CTSLP07711 333 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 ERGP11308 486 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 TYRP14679 529 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 GJA1P17302 382 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 SYN1P17600 705 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 LAG3P18627 525 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 CD53P19397 219 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 AHCYP23526 432 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 DDX6P26196 483 aaKnown RBP eCLIP4.04□□□□□ -1.76
HLA-N-201ENST00000437516 HOXD10P28358 340 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 HTR1FP30939 366 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 NTSP30990 170 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 SSTR4P31391 388 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 SOX18P35713 384 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 BUD31P41223 144 aaPredicted RBP4.04□□□□□ -1.76
HLA-N-201ENST00000437516 GPR1P46091 355 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 OMPP47874 163 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 AVPR1BP47901 424 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 RFX3P48380 749 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 ARFIP1P53367 373 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 AP2S1P53680 142 aaPredicted RBP4.04□□□□□ -1.76
HLA-N-201ENST00000437516 ATP12AP54707 1039 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 RPS26P62854 115 aaKnown RBP4.04□□□□□ -1.76
HLA-N-201ENST00000437516 CAP1Q01518 475 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 MLLT1Q03111 559 aaPredicted RBP4.04□□□□□ -1.76
HLA-N-201ENST00000437516 ST3GAL3Q11203 375 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 RPA4Q13156 261 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 IKZF1Q13422 519 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 GPR176Q14439 515 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 P2RY14Q15391 338 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 TRAM1Q15629 374 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 DECR1Q16698 335 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 PGGHGQ32M88 737 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 TMEM52BQ4KMG9 183 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 HSD17B12Q53GQ0 312 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 CEP78Q5JTW2 689 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 LHX8Q68G74 356 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 LAMTOR1Q6IAA8 161 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 OR4C11Q6IEV9 310 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 PYHIN1Q6K0P9 492 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 BHLHB9Q6PI77 547 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 ZNF782Q6ZMW2 699 aaPredicted RBP4.04□□□□□ -1.76
HLA-N-201ENST00000437516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.04□□□□□ -1.76
HLA-N-201ENST00000437516 TMEM91Q6ZNR0 172 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 PARS2Q7L3T8 475 aaKnown RBP4.04□□□□□ -1.76
HLA-N-201ENST00000437516 GET4Q7L5D6 327 aaPredicted RBP4.04□□□□□ -1.76
HLA-N-201ENST00000437516 RRM2BQ7LG56 351 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 LHFPL3Q86UP9 236 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 ADIPOR2Q86V24 386 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 GLCCI1Q86VQ1 547 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 AMIGO1Q86WK6 493 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 DCUN1D3Q8IWE4 304 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 CCDC28AQ8IWP9 274 aa4.04□□□□□ -1.76
HLA-N-201ENST00000437516 ELMOD2Q8IZ81 293 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms