RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 OLFM4Q6UX06 510 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 SERINC5Q86VE9 423 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 ZNF410Q86VK4 478 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 CACUL1Q86Y37 369 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 CARNMT1Q8N4J0 409 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 CLEC1AQ8NC01 280 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 TRPV3Q8NET8 790 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 RNASE8Q8TDE3 154 aaKnown RBP2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 PHYHIPLQ96FC7 376 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 ZNF274Q96GC6 653 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 NAP1L3Q99457 506 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 SPAG8Q99932 426 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 CCDC28BQ9BUN5 200 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 ASB8Q9H765 288 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 ZNF665Q9H7R5 613 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 NMUR1Q9HB89 426 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 UBE2TQ9NPD8 197 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 ACOXLQ9NUZ1 547 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 MED17Q9NVC6 651 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 APPL1Q9UKG1 709 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 EXOC7Q9UPT5 735 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 EXOC6BQ9Y2D4 811 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 MRPS2Q9Y399 296 aaKnown RBP2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 SNX5Q9Y5X3 404 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 MKI67P46013 3256 aaKnown RBP2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 SCN4AP35499 1836 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 FER1L5A0AVI2 2057 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 USP47Q96K76 1375 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 PLEKHG2Q9H7P9 1386 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 COL4A1P02462 1669 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 ZNF831Q5JPB2 1677 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 C5orf51A6NDU8 294 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 A8MU76 341 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 SLC28A1O00337 649 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 ARPC1BO15143 372 aaKnown RBP2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 HDAC3O15379 428 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 STBD1O95210 358 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 CPNE6O95741 557 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 EPOP01588 193 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 SFTPBP07988 381 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 FAM200BP0CF97 657 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 GLRA1P23415 457 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 FCARP24071 287 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 LMO2P25791 158 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 STIP1P31948 543 aaKnown RBP2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 SLC12A3P55017 1021 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 BTG1P62324 171 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 MSLNQ13421 630 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 PDE7AQ13946 482 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 GIT2Q14161 759 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 OR1C1Q15619 314 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 HERC4Q5GLZ8 1057 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 TEX35Q5T0J7 233 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 ETFRF1Q6IPR1 90 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 PLBD1Q6P4A8 553 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 Q71RC1 249 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 TMUB2Q71RG4 321 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 CARM1Q86X55 608 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 STHQ8IWL8 128 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 CNTN4Q8IWV2 1026 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 FBXW8Q8N3Y1 598 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 OR6M1Q8NGM8 313 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 OR4Q3Q8NH05 313 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 ST7LQ8TDW4 575 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 LIPHQ8WWY8 451 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 PRCCQ92733 491 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 SNX21Q969T3 373 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 SLCO4A1Q96BD0 722 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 ALKBH3Q96Q83 286 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 APOL2Q9BQE5 337 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 ACAT2Q9BWD1 397 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 TRPV6Q9H1D0 765 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 GANQ9H2C0 597 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 KCNK13Q9HB14 408 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 CLEC5AQ9NY25 188 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 TRIM10Q9UDY6 481 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 PSORS1C1Q9UIG5 152 aa2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 TRMT6Q9UJA5 497 aaKnown RBP2.25□□□□□ -2.05
HMGB1P31-201ENST00000437242 HTTP42858 3142 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 KTN1Q86UP2 1357 aaKnown RBP2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 MAP3K19Q56UN5 1328 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 RALGAPA1Q6GYQ0 2036 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 BRCA2P51587 3418 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 GLTPD2A6NH11 291 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 SLC9B1P1A6NJY1 282 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 ARHGEF33A8MVX0 844 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 ANHXE9PGG2 379 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 CHEK1O14757 476 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 PSMD3O43242 534 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 ZBTB14O43829 449 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 RENP00797 406 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 PDGFBP01127 241 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 NUDT17P0C025 328 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 ADORA3P0DMS8 318 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 ZNF18P17022 549 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 GJB2P29033 226 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 NT5C2P49902 561 aa2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 HNRNPA3P51991 378 aaKnown RBP2.24□□□□□ -2.05
HMGB1P31-201ENST00000437242 CASP9P55211 416 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms