RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 GINS1Q14691 196 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 SLC43A2Q8N370 569 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 CPEB3Q8NE35 698 aaKnown RBP10.67□□□□□ -0.7
SCN4A-201ENST00000435607 TFAP2BQ92481 460 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 CNOT9Q92600 299 aaKnown RBP10.67□□□□□ -0.7
SCN4A-201ENST00000435607 SENP5Q96HI0 755 aaPredicted RBP10.67□□□□□ -0.7
SCN4A-201ENST00000435607 LGALS13Q9UHV8 139 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 BLACEA4D250 179 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 LRRC30A6NM36 301 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 A8MT66 165 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 ZNF705EA8MWA4 302 aaPredicted RBP10.67□□□□□ -0.7
SCN4A-201ENST00000435607 H3BML4 177 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 M0R233 179 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 RPL23AP62750 156 aaKnown RBP10.67□□□□□ -0.7
SCN4A-201ENST00000435607 BEST3Q8N1M1 668 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 OR51A7Q8NH64 312 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 ZNF296Q8WUU4 475 aaPredicted RBP10.67□□□□□ -0.7
SCN4A-201ENST00000435607 HLA-CQ95604 372 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 TIMD4Q96H15 378 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 AGPAT4Q9NRZ5 378 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 PLEKHJ1Q9NW61 149 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 RBPJLQ9UBG7 517 aa10.67□□□□□ -0.7
SCN4A-201ENST00000435607 CD300LBA8K4G0 201 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 SERPINA7P05543 415 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 BMP6P22004 513 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 SLC10A1Q14973 349 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 RNASE10Q5GAN6 216 aaKnown RBP10.66□□□□□ -0.7
SCN4A-201ENST00000435607 SYPL2Q5VXT5 272 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 CEACAM19Q7Z692 300 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 BPHLQ86WA6 291 aaPredicted RBP10.66□□□□□ -0.7
SCN4A-201ENST00000435607 SGPP2Q8IWX5 399 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 OR5T1Q8NG75 326 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 PIGVQ9NUD9 493 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 TOR1BO14657 336 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 SURF4O15260 269 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 GLB1P16278 677 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 CSNK1A1P48729 337 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 TGFBIQ15582 683 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 TMPRSS7Q7RTY8 843 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 CWH43Q9H720 699 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 PISDQ9UG56 409 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 RBMX2Q9Y388 322 aaKnown RBP10.66□□□□□ -0.7
SCN4A-201ENST00000435607 PREX1Q8TCU6 1659 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 TTC24A2A3L6 582 aaPredicted RBP10.66□□□□□ -0.7
SCN4A-201ENST00000435607 RGS9O75916 674 aaPredicted RBP10.66□□□□□ -0.7
SCN4A-201ENST00000435607 S1PR4O95977 384 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 AOC1P19801 751 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 NAA10P41227 235 aaPredicted RBP10.66□□□□□ -0.7
SCN4A-201ENST00000435607 CHRNEQ04844 493 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 MSMO1Q15800 293 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 MKXQ8IYA7 352 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 CLDN19Q8N6F1 224 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 METTL25Q8N6Q8 603 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 VGLL2Q8N8G2 317 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 KDM1BQ8NB78 822 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 OR51Q1Q8NH59 317 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 SFXN5Q8TD22 340 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 RAB8BQ92930 207 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 RSPRY1Q96DX4 576 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 BOD1Q96IK1 185 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 TTTY10Q9BZA0 68 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 OR2S2Q9NQN1 319 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 SERTAD4Q9NUC0 356 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 COCHO43405 550 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 ENSAO43768 121 aaKnown RBP10.66□□□□□ -0.7
SCN4A-201ENST00000435607 SIX3O95343 332 aaPredicted RBP10.66□□□□□ -0.7
SCN4A-201ENST00000435607 ACRV1P26436 265 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 TRIM74Q86UV6 250 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 CSNK2A3Q8NEV1 391 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 FAM84AQ96KN4 292 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 CHD4Q14839 1912 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 TIA1P31483 386 aaKnown RBP eCLIP10.66□□□□□ -0.7
SCN4A-201ENST00000435607 IRF9Q00978 393 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 LMAN2Q12907 356 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 ZNF542PQ5EBM4 170 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 TMEM110Q86TL2 294 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 SMG8Q8ND04 991 aaKnown RBP10.66□□□□□ -0.7
SCN4A-201ENST00000435607 RPLP0P6Q8NHW5 317 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 CREB3L4Q8TEY5 395 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 UBL7Q96S82 380 aaPredicted RBP10.66□□□□□ -0.7
SCN4A-201ENST00000435607 ZPBPQ9BS86 351 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 CREBZFQ9NS37 354 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 SLC7A7Q9UM01 511 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 GABRR3A8MPY1 467 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 MEN1O00255 615 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 C2orf76Q3KRA6 126 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 SERINC2Q96SA4 455 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 NUDT9Q9BW91 350 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 CCM2LQ9NUG4 571 aaPredicted RBP10.66□□□□□ -0.7
SCN4A-201ENST00000435607 ZNF223Q9UK11 482 aaPredicted RBP10.66□□□□□ -0.7
SCN4A-201ENST00000435607 PRELID1Q9Y255 219 aa10.66□□□□□ -0.7
SCN4A-201ENST00000435607 NKX6-3A6NJ46 265 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 LSM1O15116 133 aaKnown RBP10.65□□□□□ -0.7
SCN4A-201ENST00000435607 HK3P52790 923 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 ECM1Q16610 540 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 ANKRD22Q5VYY1 191 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 ZNF367Q7RTV3 350 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 ZADH2Q8N4Q0 377 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 CHCHD4Q8N4Q1 142 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 MARVELD2Q8N4S9 558 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms