RNA–Protein interactions for RNA: ENST00000433383.1

NEK4P1-201, Transcript of NIMA-related kinase 4 pseudogene 1, humanhuman

BASIC

Gene NEK4P1, Length 879 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P1-201ENST00000433383 PHF13Q86YI8 300 aaPredicted RBP3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 RBM45Q8IUH3 476 aaKnown RBP3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 BBS7Q8IWZ6 715 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 MCOLN2Q8IZK6 566 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 OR4N4Q8N0Y3 316 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 MARVELD2Q8N4S9 558 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 C1orf52Q8N6N3 182 aaKnown RBP3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 RNF148Q8N7C7 305 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 CSNK2A3Q8NEV1 391 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 OR4K14Q8NGD5 310 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 OR2V1Q8NHB1 315 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 RNASE11Q8TAA1 199 aaKnown RBP3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 PNPT1Q8TCS8 783 aaKnown RBP3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 MRGPRDQ8TDS7 321 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 BORCS5Q969J3 196 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 CCDC127Q96BQ5 260 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 SAT2Q96F10 170 aaPredicted RBP3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 DUS3LQ96G46 650 aaKnown RBP3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 RILPQ96NA2 401 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 TEAD3Q99594 435 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 FAM110AQ9BQ89 295 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 CNPY3Q9BT09 278 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 ALKBH7Q9BT30 221 aaPredicted RBP3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 FNDC11Q9BVV2 318 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 DDA1Q9BW61 102 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 ANKRD60Q9BZ19 345 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 FTOQ9C0B1 505 aaKnown RBP eCLIP3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 RAB1BQ9H0U4 201 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 TMEM185BQ9H7F4 350 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 NOL11Q9H8H0 719 aaKnown RBP3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 C10orf88Q9H8K7 445 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 RAVER2Q9HCJ3 691 aaKnown RBP3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 APMAPQ9HDC9 416 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 MMP25Q9NPA2 562 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 CCNB1IP1Q9NPC3 277 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 ZNF302Q9NR11 478 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 SPANXA1Q9NS26 97 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 ZDHHC7Q9NXF8 308 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 CRLS1Q9UJA2 301 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 MGAT4BQ9UQ53 548 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 GDAQ9Y2T3 454 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 ARL2BPQ9Y2Y0 163 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 PKP3Q9Y446 797 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 ADGRF5Q8IZF2 1346 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 NRCAMQ92823 1304 aa3.34□□□□□ -1.87
NEK4P1-201ENST00000433383 NID2Q14112 1375 aa3.34□□□□□ -1.88
NEK4P1-201ENST00000433383 A0A0U1RQJ8 604 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 OR2A25A4D2G3 310 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 MTMR11A4FU01 709 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 FAM90A18PA6NE21 464 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 FAM90A16PA6NEW6 464 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 C3orf70A6NLC5 250 aaPredicted RBP3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 FAM90A9PA6NNJ1 464 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 SLC38A8A6NNN8 435 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 WASHC1A8K0Z3 465 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 FAM90A5PA8MXJ8 464 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 FAM72CH0Y354 149 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 SGK494L7N484 410 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 M0QYT0 321 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 CTDSP2O14595 271 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 ADAMDEC1O15204 470 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 ACOX3O15254 700 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 CHADO15335 359 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 PAPSS1O43252 624 aaPredicted RBP3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 SUPT3HO75486 399 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 SEC24AO95486 1093 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 MBP02144 154 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 GBAP04062 536 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 CD3GP09693 182 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 FAM90A15PP0C7V4 464 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 FAM90A14PP0C7W9 464 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 SMIM10L1P0DMW3 83 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 FGF5P12034 268 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 PEPDP12955 493 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 COX4I1P13073 169 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 ETS2P15036 469 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 RPA2P15927 270 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 ZNF26P17031 533 aaPredicted RBP3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 ZNF8P17098 575 aaPredicted RBP3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 ZNF10P21506 573 aaPredicted RBP3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 CNR1P21554 472 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 WARSP23381 471 aaKnown RBP3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 UCP1P25874 307 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 DPP4P27487 766 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 PPP2R1BP30154 601 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 OXTRP30559 389 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 MC5RP33032 325 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 TALDO1P37837 337 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 SLC1A3P43003 542 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 GSSP48637 474 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 IDH2P48735 452 aaKnown RBP3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 P2RY4P51582 365 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 CLDN18P56856 261 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 TAS2R60P59551 318 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 VSNL1P62760 191 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 RPS15P62841 145 aaKnown RBP3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 IL9RQ01113 521 aa3.33□□□□□ -1.88
NEK4P1-201ENST00000433383 IRF8Q02556 426 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms