RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 LAPTM4BQ86VI4 370 aa16.99■□□□□ 0.31
HMGN1-206ENST00000431390 CDRT4Q8N9R6 151 aa16.99■□□□□ 0.31
HMGN1-206ENST00000431390 OR5D16Q8NGK9 328 aa16.99■□□□□ 0.31
HMGN1-206ENST00000431390 SLC38A5Q8WUX1 472 aa16.99■□□□□ 0.31
HMGN1-206ENST00000431390 CANT1Q8WVQ1 401 aa16.99■□□□□ 0.31
HMGN1-206ENST00000431390 RAB8BQ92930 207 aa16.99■□□□□ 0.31
HMGN1-206ENST00000431390 C16orf58Q96GQ5 468 aa16.99■□□□□ 0.31
HMGN1-206ENST00000431390 WDR54Q9H977 334 aa16.99■□□□□ 0.31
HMGN1-206ENST00000431390 EQTNQ9NQ60 294 aa16.99■□□□□ 0.31
HMGN1-206ENST00000431390 CCM2LQ9NUG4 571 aaPredicted RBP16.99■□□□□ 0.31
HMGN1-206ENST00000431390 GIN1Q9NXP7 522 aa16.99■□□□□ 0.31
HMGN1-206ENST00000431390 NXT1Q9UKK6 140 aaKnown RBP16.99■□□□□ 0.31
HMGN1-206ENST00000431390 SAMD4AQ9UPU9 718 aaKnown RBP16.99■□□□□ 0.31
HMGN1-206ENST00000431390 C5orf58C9J3I9 102 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 SOX30O94993 753 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 SERPINA1P01009 418 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 PRB1P04280 392 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 HOXB6P17509 224 aaKnown RBP16.98■□□□□ 0.31
HMGN1-206ENST00000431390 TNNI3P19429 210 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 EFNA3P52797 238 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 ELOAQ14241 798 aaKnown RBP16.98■□□□□ 0.31
HMGN1-206ENST00000431390 GNA13Q14344 377 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 SNCBQ16143 134 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 PRSS58Q8IYP2 241 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 ADGRG5Q8IZF4 528 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 SIMC1Q8NDZ2 872 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 OR52R1Q8NGF1 315 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 ADAMTS15Q8TE58 950 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 XAGE5Q8WWM1 108 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 HOXB13Q92826 284 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-206ENST00000431390 RNF145Q96MT1 663 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 YIPF4Q9BSR8 244 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 EFHD1Q9BUP0 239 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 ARMC1Q9NVT9 282 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 ANAPC2Q9UJX6 822 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 RPS6KA6Q9UK32 745 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 AP4S1Q9Y587 144 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 C17orf105B2RV13 164 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 PRAMEF2O60811 474 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 BCHEP06276 602 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 HEXBP07686 556 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 ANPEPP15144 967 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 CLCN2P51788 898 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 PCBP3P57721 371 aaKnown RBP16.98■□□□□ 0.31
HMGN1-206ENST00000431390 ZNF267Q14586 743 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-206ENST00000431390 EXOSC7Q15024 291 aaKnown RBP16.98■□□□□ 0.31
HMGN1-206ENST00000431390 LRRC23Q53EV4 343 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-206ENST00000431390 LCN10Q6JVE6 187 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 CBLL1Q75N03 491 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 PATL1Q86TB9 770 aaKnown RBP16.98■□□□□ 0.31
HMGN1-206ENST00000431390 TMEM151BQ8IW70 566 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 OR7G1Q8NGA0 311 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 DOK4Q8TEW6 326 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 PTPMT1Q8WUK0 201 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-206ENST00000431390 SLCO4A1Q96BD0 722 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 TMEM19Q96HH6 336 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 STACQ99469 402 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 SPSB2Q99619 263 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 UGT2B28Q9BY64 529 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 PIGUQ9H490 435 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 PNO1Q9NRX1 252 aaKnown RBP16.98■□□□□ 0.31
HMGN1-206ENST00000431390 EXD2Q9NVH0 621 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 NKX1-2Q9UD57 310 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-206ENST00000431390 GPN3Q9UHW5 284 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-206ENST00000431390 LIPT1Q9Y234 373 aa16.98■□□□□ 0.31
HMGN1-206ENST00000431390 KNTC1P50748 2209 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 CCDC88CQ9P219 2028 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 A0A1W2PNU3 283 aaPredicted RBP16.97■□□□□ 0.31
HMGN1-206ENST00000431390 IDSB3KWA1 339 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 C9J4A7 227 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 GCM2O75603 506 aaPredicted RBP16.97■□□□□ 0.31
HMGN1-206ENST00000431390 STK17BO94768 372 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 MAP3K8P41279 467 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 DUSP8Q13202 625 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 MAPK11Q15759 364 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 CRB2Q5IJ48 1285 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 ATAD3BQ5T9A4 648 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 TMEM164Q5U3C3 297 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 PRAMEF8Q5VWM4 474 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 MLIPQ5VWP3 458 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 PRAMEF7Q5VXH5 474 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 SLC16A11Q8NCK7 471 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 PAPD5Q8NDF8 572 aaKnown RBP16.97■□□□□ 0.31
HMGN1-206ENST00000431390 OR14A16Q8NHC5 309 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 FBXO30Q8TB52 745 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 DAZLQ92904 295 aaKnown RBP16.97■□□□□ 0.31
HMGN1-206ENST00000431390 MR1Q95460 341 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 FBXL20Q96IG2 436 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 ART5Q96L15 291 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 CNPPD1Q9BV87 410 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 B3GNT4Q9C0J1 378 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 SOX17Q9H6I2 414 aaPredicted RBP16.97■□□□□ 0.31
HMGN1-206ENST00000431390 DUSP22Q9NRW4 184 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 ERVK-19Q9WJR5 959 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 CLCA3PQ9Y6N3 262 aa16.97■□□□□ 0.31
HMGN1-206ENST00000431390 PRAMEF27A3QJZ7 478 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 TTC36A6NLP5 189 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 SLC28A2O43868 658 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 CNOT3O75175 753 aaKnown RBP16.96■□□□□ 0.31
HMGN1-206ENST00000431390 ALOX12BO75342 701 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms