RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 KCNIP3Q9Y2W7 256 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 ANK1P16157 1881 aa8.4□□□□□ -1.07
CDC42BPA-206ENST00000429440 TRBV23OR9-2A0A075B6M9 112 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 AP4M1O00189 453 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 PSMD3O43242 534 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 PRKYO43930 277 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 CPN1P15169 458 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 CD19P15391 556 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 ABOP16442 354 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 G0S2P27469 103 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 KIR3DL2P43630 455 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 AVPR1BP47901 424 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 OLIG2Q13516 323 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 KIAA0040Q15053 153 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 SLC35D3Q5M8T2 416 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 ASB18Q6ZVZ8 466 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 USP30Q70CQ3 517 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 OTOP2Q7RTS6 562 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 NUDT13Q86X67 352 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 FAM71CQ8NEG0 241 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR56A4Q8NGH8 313 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 POC1BQ8TC44 478 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 IFI44Q8TCB0 444 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 RAB24Q969Q5 203 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 RAB3CQ96E17 227 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 FAM120BQ96EK7 910 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 TEFMQ96QE5 360 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 NXF3Q9H4D5 531 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 MTG2Q9H4K7 406 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 FZD3Q9NPG1 666 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 CFAP97Q9P2B7 532 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZNF629Q9UEG4 869 aaPredicted RBP8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 FBXL3Q9UKT7 428 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 WASF3Q9UPY6 502 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 A0A087WZ62 844 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 A0A087X0M5 115 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 A0A1B0GX30 115 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR2M5A3KFT3 312 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 H0YCG3 227 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 J3KR12 359 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 BCAT2O15382 392 aaPredicted RBP8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 LANCL1O43813 399 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 CACNG3O60359 315 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 CRCPO75575 148 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 USP17L7P0C7H9 530 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 UROSP10746 265 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 ANXA8P13928 327 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 C5AR1P21730 350 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 EDNRBP24530 442 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 AKT1P31749 480 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 GNALP38405 381 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 RFX3P48380 749 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 CDC42P60953 191 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 CXADRP78310 365 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 IL10RBQ08334 325 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 BIKQ13323 160 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 SMAD4Q13485 552 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 HTR4Q13639 388 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 BOP1Q14137 746 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZRANB3Q5FWF4 1079 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 PYY3Q5JQD4 70 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 LIPKQ5VXJ0 399 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 NAPEPLDQ6IQ20 393 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 H3F3CQ6NXT2 135 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 LBX2Q6XYB7 198 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 APOBEC3FQ8IUX4 373 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 PTGR2Q8N8N7 351 aaPredicted RBP8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 CHST14Q8NCH0 376 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR5B17Q8NGF7 314 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 SP7Q8TDD2 431 aaPredicted RBP8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 R3HDM4Q96D70 268 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 SENP5Q96HI0 755 aaPredicted RBP8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 NFKBIZQ9BYH8 718 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 ALG9Q9H6U8 611 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 SLC25A19Q9HC21 320 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZNF302Q9NR11 478 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 UXTQ9UBK9 157 aaPredicted RBP8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 RPS6KB2Q9UBS0 482 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR12D3Q9UGF7 316 aa8.39□□□□□ -1.07
CDC42BPA-206ENST00000429440 MCM3APO60318 1980 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 TRBV5-3A0A0A0MS03 114 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 TSTD3H0UI37 97 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZNF593O00488 134 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 KHDRBS3O75525 346 aaKnown RBP8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 ANXA9O76027 345 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 WISP3O95389 354 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 HPXP02790 462 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 CRHP06850 196 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 UBBP0CG47 229 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 UBCP0CG48 685 aaKnown RBP8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 ADCYAP1P18509 176 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 NOS2P35228 1153 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 CD86P42081 329 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 SLC1A2P43004 574 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 PPT1P50897 306 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 CCR6P51684 374 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 RPS27AP62979 156 aaKnown RBP8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 UBA52P62987 128 aaKnown RBP8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 VLDLRP98155 873 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 GLO1Q04760 184 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms