RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 PACS2Q86VP3 889 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 BPHLQ86WA6 291 aaPredicted RBP8.26□□□□□ -1.09
SMC6-204ENST00000428868 ZNF615Q8N8J6 731 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 ZSCAN1Q8NBB4 408 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 PLPP5Q8NEB5 264 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 TNIP2Q8NFZ5 429 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 OR4N2Q8NGD1 307 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 SLC2A12Q8TD20 617 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 ZNF721Q8TF20 911 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 LRTOMTQ8WZ04 291 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 C8orf44Q96CB5 159 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 HSH2DQ96JZ2 352 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 TAAR9Q96RI9 348 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 LMF1Q96S06 567 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 WDR77Q9BQA1 342 aaPredicted RBP8.26□□□□□ -1.09
SMC6-204ENST00000428868 NUDT9Q9BW91 350 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 ITPAQ9BY32 194 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 SPRY4Q9C004 299 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 TRIM15Q9C019 465 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 OR8D2Q9GZM6 311 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 QRSL1Q9H0R6 528 aaKnown RBP8.26□□□□□ -1.09
SMC6-204ENST00000428868 DCLRE1BQ9H816 532 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 CCM2LQ9NUG4 571 aaPredicted RBP8.26□□□□□ -1.09
SMC6-204ENST00000428868 OLAHQ9NV23 265 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 DLL3Q9NYJ7 618 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 ANAPC2Q9UJX6 822 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 AURKCQ9UQB9 309 aa8.26□□□□□ -1.09
SMC6-204ENST00000428868 HEMK1Q9Y5R4 338 aaPredicted RBP8.26□□□□□ -1.09
SMC6-204ENST00000428868 AKAP13Q12802 2813 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 A8MVJ9 347 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 MASP2O00187 686 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 ALOX12BO75342 701 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 KLF7O75840 302 aaPredicted RBP8.25□□□□□ -1.09
SMC6-204ENST00000428868 PGM3O95394 542 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 H6PDO95479 791 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 STAMBPO95630 424 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 ZNF682O95780 498 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 EPPINO95925 133 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 IGKV1D-16P01601 117 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 SEMG1P04279 462 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 IGKV3-11P04433 115 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 GPIP06744 558 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 HEXBP07686 556 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 UMODP07911 640 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 IFI6P09912 130 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 FREM3P0C091 2139 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 TNNI3P19429 210 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 CD247P20963 164 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 CSRP1P21291 193 aaKnown RBP8.25□□□□□ -1.09
SMC6-204ENST00000428868 IL10P22301 178 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 NOVA1P51513 510 aaKnown RBP8.25□□□□□ -1.09
SMC6-204ENST00000428868 AP2B1P63010 937 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 PSG6Q00889 435 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 OCA2Q04671 838 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 RBBP4Q09028 425 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 NSDHLQ15738 373 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 SNCBQ16143 134 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 ZNF630Q2M218 657 aaPredicted RBP8.25□□□□□ -1.09
SMC6-204ENST00000428868 GPAT3Q53EU6 434 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 SFT2D3Q587I9 215 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 TBCELQ5QJ74 424 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 HEPHL1Q6MZM0 1159 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 FRRS1Q6ZNA5 592 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 CCDC80Q76M96 950 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 TSEN54Q7Z6J9 526 aaKnown RBP8.25□□□□□ -1.09
SMC6-204ENST00000428868 AMIGO2Q86SJ2 522 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 TMEM102Q8N9M5 508 aaPredicted RBP8.25□□□□□ -1.09
SMC6-204ENST00000428868 SMYD1Q8NB12 490 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 GPR32P1Q8NGA4 272 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 OR52E4Q8NGH9 312 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 C16orf52Q8NHV5 167 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 WDR36Q8NI36 951 aaKnown RBP8.25□□□□□ -1.09
SMC6-204ENST00000428868 CT55Q8WUE5 264 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 HOXB13Q92826 284 aaPredicted RBP8.25□□□□□ -1.09
SMC6-204ENST00000428868 FKBP10Q96AY3 582 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 ZG16BQ96DA0 208 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 SLC47A1Q96FL8 570 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 RBM18Q96H35 190 aaKnown RBP8.25□□□□□ -1.09
SMC6-204ENST00000428868 SENP5Q96HI0 755 aaPredicted RBP8.25□□□□□ -1.09
SMC6-204ENST00000428868 VSTM2LQ96N03 204 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 LRFN5Q96NI6 719 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 WFDC6Q9BQY6 131 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 OR10A5Q9H207 317 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 SLC26A1Q9H2B4 701 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 SLC38A1Q9H2H9 487 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 C14orf105Q9NVL8 296 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 AKAP7Q9P0M2 348 aaPredicted RBP8.25□□□□□ -1.09
SMC6-204ENST00000428868 STX18Q9P2W9 335 aaKnown RBP8.25□□□□□ -1.09
SMC6-204ENST00000428868 P2RX2Q9UBL9 471 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 C3orf18Q9UK00 162 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 ZNF223Q9UK11 482 aaPredicted RBP8.25□□□□□ -1.09
SMC6-204ENST00000428868 ANGPT4Q9Y264 503 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 AP4S1Q9Y587 144 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 AK5Q9Y6K8 562 aa8.25□□□□□ -1.09
SMC6-204ENST00000428868 C5orf58C9J3I9 102 aa8.24□□□□□ -1.09
SMC6-204ENST00000428868 TMX2-CTNND1H3BSU7 103 aa8.24□□□□□ -1.09
SMC6-204ENST00000428868 M0QX08 132 aa8.24□□□□□ -1.09
SMC6-204ENST00000428868 ASNA1O43681 348 aa8.24□□□□□ -1.09
SMC6-204ENST00000428868 FOXD2O60548 495 aaPredicted RBP8.24□□□□□ -1.09
SMC6-204ENST00000428868 FCMRO60667 390 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms