RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 SFXN2Q96NB2 322 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 PSD3Q9NYI0 1048 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 HEATR5AQ86XA9 2040 aa16.6■□□□□ 0.25
UPK3BP1-201ENST00000428678 EIF3HO15372 352 aaKnown RBP eCLIP16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 ZSCAN12O43309 604 aa16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 TGM6O95932 706 aa16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 DEKP35659 375 aaKnown RBP16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 MC3RP41968 323 aa16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 ALDH18A1P54886 795 aaKnown RBP16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 MRPS25P82663 173 aaKnown RBP16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 CALCOCO2Q13137 446 aa16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 CYS1Q717R9 158 aa16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 PLCZ1Q86YW0 608 aa16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 L3MBTL4Q8NA19 623 aa16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 ADCY4Q8NFM4 1077 aa16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 RHEBL1Q8TAI7 183 aa16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 CTHRC1Q96CG8 243 aa16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 MRPL1Q9BYD6 325 aaKnown RBP16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 DPH5Q9H2P9 285 aa16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 MAT2BQ9NZL9 334 aa16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 DKKL1Q9UK85 242 aa16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 DLGAP4Q9Y2H0 992 aa16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 ACOT9Q9Y305 439 aa16.59■□□□□ 0.25
UPK3BP1-201ENST00000428678 GOLGA6L10A6NI86 522 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 CCDC188H7C350 402 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 ERAL1O75616 437 aaKnown RBP16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 CLDN9O95484 217 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 CRYGSP22914 178 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 SRD5A2P31213 254 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 FEN1P39748 380 aaKnown RBP16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 CD79BP40259 229 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 CLDN18P56856 261 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 GPX6P59796 221 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 IRF9Q00978 393 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 MGAT2Q10469 447 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 MAP4K2Q12851 820 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 FAM83EQ2M2I3 478 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 PRICKLE4Q2TBC4 344 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 CCNYL2Q5T2Q4 361 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 CHMP1BQ7LBR1 199 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 CXXC5Q7LFL8 322 aaKnown RBP16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 PAGE2Q7Z2X7 111 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 CENPLQ8N0S6 344 aaPredicted RBP16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 ATP6V1E2Q96A05 226 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 STARD4Q96DR4 205 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 DTNBP1Q96EV8 351 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 CDK15Q96Q40 435 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 CPSF2Q9P2I0 782 aaKnown RBP16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 TRPS1Q9UHF7 1281 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 FBXL2Q9UKC9 423 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 PLLPQ9Y342 182 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 WIF1Q9Y5W5 379 aa16.58■□□□□ 0.24
UPK3BP1-201ENST00000428678 HCRTR2O43614 444 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 REM1O75628 298 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 SIX3O95343 332 aaPredicted RBP16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 CBX7O95931 251 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 ATP1B1P05026 303 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 CRHP06850 196 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 GSTA2P09210 222 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 ZNF708P17019 499 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 MAPK12P53778 367 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 SIRPAP78324 504 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 HMGCS1Q01581 520 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 TTC19Q6DKK2 380 aaPredicted RBP16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 OR5M10Q6IEU7 315 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 OR2A2Q6IF42 318 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 SLC48A1Q6P1K1 146 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 VWA1Q6PCB0 445 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 C20orf204Q6ZNR8 217 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 OR52R1Q8NGF1 315 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 TMBIM1Q969X1 311 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 TMCO6Q96DC7 493 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 PGM2Q96G03 612 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 COL21A1Q96P44 957 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 OPN3Q9H1Y3 402 aaPredicted RBP16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 NOL11Q9H8H0 719 aaKnown RBP16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 AHSPQ9NZD4 102 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 ADAM29Q9UKF5 820 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 PCDHA9Q9Y5H5 950 aa16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 TNPO3Q9Y5L0 923 aaKnown RBP16.57■□□□□ 0.24
UPK3BP1-201ENST00000428678 A0A087X1B8 175 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 SLC22A20A6NK97 555 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 GUCY1B2O75343 617 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 CSNK2A2P19784 350 aaPredicted RBP16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 UGT2B10P36537 528 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 PAFAH1B1P43034 410 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 PPICP45877 212 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 LTB4RQ15722 352 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 FRG2Q64ET8 278 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 ZNF474Q6S9Z5 364 aaPredicted RBP16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 ZNF550Q7Z398 422 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 BTLAQ7Z6A9 289 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 UBQLNLQ8IYU4 475 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 SPATA3Q8NHX4 192 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 PPP1R14CQ8TAE6 165 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 KLHL29Q96CT2 875 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 ZC3HAV1LQ96H79 300 aaKnown RBP16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 HS3ST6Q96QI5 342 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 FRG2BQ96QU4 278 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 PIGQQ9BRB3 760 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms