RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 FRG2CA6NGY1 282 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 CAPN14A8MX76 684 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 SLC28A1O00337 649 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 TP53I11O14683 189 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 SUSD5O60279 629 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 PLOD3O60568 738 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 SEC22BO75396 215 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 FGF4P08620 206 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 LINC00032P0C843 101 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 NAGAP17050 411 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 SDC1P18827 310 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 SMSP52788 366 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 NRG3P56975 720 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 KRT71Q3SY84 523 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 RFTN2Q52LD8 501 aaPredicted RBP17.54■□□□□ 0.4
COL9A2-204ENST00000427563 ZNF385BQ569K4 471 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 CEP85LQ5SZL2 805 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 PAOXQ6QHF9 649 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 FAM9CQ8IZT9 166 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 ZNF597Q96LX8 424 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 IQCGQ9H095 443 aaKnown RBP17.54■□□□□ 0.4
COL9A2-204ENST00000427563 TP63Q9H3D4 680 aaPredicted RBP17.54■□□□□ 0.4
COL9A2-204ENST00000427563 GLIPR2Q9H4G4 154 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 FOLH1BQ9HBA9 442 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 C1orf109Q9NX04 203 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 PRODH2Q9UF12 536 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 PKDREJQ9NTG1 2253 aa17.54■□□□□ 0.4
COL9A2-204ENST00000427563 KIAA1549Q9HCM3 1950 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 C2orf72A6NCS6 295 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 OR14I1A6ND48 311 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 LSM1O15116 133 aaKnown RBP17.53■□□□□ 0.4
COL9A2-204ENST00000427563 ACOX3O15254 700 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 TSPAN2O60636 221 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 HCN1O60741 890 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 CLDN14O95500 239 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 JUNP05412 331 aaKnown RBP17.53■□□□□ 0.4
COL9A2-204ENST00000427563 BPGMP07738 259 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 MC3RP41968 323 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 KIR3DL1P43629 444 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 TRPC1P48995 793 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 MAN2A2P49641 1150 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 TMED10P49755 219 aaKnown RBP17.53■□□□□ 0.4
COL9A2-204ENST00000427563 NUP107P57740 925 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 TBCELQ5QJ74 424 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 ANKRD26P1Q6NSI1 321 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 TMEM81Q6P7N7 255 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 SAMD14Q8IZD0 417 aaPredicted RBP17.53■□□□□ 0.4
COL9A2-204ENST00000427563 SLC34A3Q8N130 599 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 OR4N2Q8NGD1 307 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 TWIST2Q8WVJ9 160 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 GFM2Q969S9 779 aaKnown RBP17.53■□□□□ 0.4
COL9A2-204ENST00000427563 TMBIM1Q969X1 311 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 ERP27Q96DN0 273 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 METTL2AQ96IZ6 378 aaKnown RBP17.53■□□□□ 0.4
COL9A2-204ENST00000427563 AMDHD1Q96NU7 426 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 GNRHR2Q96P88 292 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 BBS4Q96RK4 519 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 GALNT9Q9HCQ5 603 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 ACKR4Q9NPB9 350 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 QPCTLQ9NXS2 382 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 TRAF6Q9Y4K3 522 aa17.53■□□□□ 0.4
COL9A2-204ENST00000427563 B4DXG7 233 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 BCKDKO14874 412 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 PIP5K1BO14986 540 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 RGS14O43566 566 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 PSMG1O95456 288 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 MPIP34949 423 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 NCBP2P52298 156 aaKnown RBP eCLIP17.52■□□□□ 0.4
COL9A2-204ENST00000427563 DCAF7P61962 342 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 PLCXD2Q0VAA5 305 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 TNFAIP8L3Q5GJ75 292 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 TMEM107Q6UX40 140 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 IKBIPQ70UQ0 350 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 NUP54Q7Z3B4 507 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 CROCCP2Q86T23 111 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 NEIL3Q8TAT5 605 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 RNF138Q8WVD3 245 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 MARVELD3Q96A59 401 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 SDCCAG3Q96C92 435 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 TMEM41AQ96HV5 264 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 C3orf30Q96M34 536 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 LDAHQ9H6V9 325 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 GIMAP4Q9NUV9 329 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 BAIAP2L1Q9UHR4 511 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 ZDHHC2Q9UIJ5 367 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 RNF6Q9Y252 685 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 C15orf41Q9Y2V0 281 aa17.52■□□□□ 0.4
COL9A2-204ENST00000427563 WBP11Q9Y2W2 641 aaKnown RBP17.52■□□□□ 0.4
COL9A2-204ENST00000427563 CSMD1Q96PZ7 3565 aa17.52■□□□□ 0.39
COL9A2-204ENST00000427563 UPK1AO00322 258 aa17.51■□□□□ 0.39
COL9A2-204ENST00000427563 GNB5O14775 395 aa17.51■□□□□ 0.39
COL9A2-204ENST00000427563 ICOSLGO75144 302 aa17.51■□□□□ 0.39
COL9A2-204ENST00000427563 ERN1O75460 977 aaKnown RBP17.51■□□□□ 0.39
COL9A2-204ENST00000427563 BCAS2O75934 225 aaPredicted RBP17.51■□□□□ 0.39
COL9A2-204ENST00000427563 SNX4O95219 450 aa17.51■□□□□ 0.39
COL9A2-204ENST00000427563 GDF1P27539 372 aa17.51■□□□□ 0.39
COL9A2-204ENST00000427563 PTPN6P29350 595 aa17.51■□□□□ 0.39
COL9A2-204ENST00000427563 RPL38P63173 70 aaKnown RBP17.51■□□□□ 0.39
COL9A2-204ENST00000427563 PSG6Q00889 435 aa17.51■□□□□ 0.39
COL9A2-204ENST00000427563 XKR7Q5GH72 579 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms