RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 AIG1Q9NVV5 245 aa4.73□□□□□ -1.65
LINC00458-202ENST00000427299 SMOXQ9NWM0 555 aa4.73□□□□□ -1.65
LINC00458-202ENST00000427299 NUDT4Q9NZJ9 180 aa4.73□□□□□ -1.65
LINC00458-202ENST00000427299 C3orf18Q9UK00 162 aa4.73□□□□□ -1.65
LINC00458-202ENST00000427299 INTS6Q9UL03 887 aaKnown RBP4.73□□□□□ -1.65
LINC00458-202ENST00000427299 PAIP2BQ9ULR5 123 aaKnown RBP4.73□□□□□ -1.65
LINC00458-202ENST00000427299 SH3GLB1Q9Y371 365 aa4.73□□□□□ -1.65
LINC00458-202ENST00000427299 KIAA1549LQ6ZVL6 1849 aa4.73□□□□□ -1.65
LINC00458-202ENST00000427299 DENND4CQ5VZ89 1909 aa4.73□□□□□ -1.65
LINC00458-202ENST00000427299 ANAPC1Q9H1A4 1944 aa4.73□□□□□ -1.65
LINC00458-202ENST00000427299 THSD7BQ9C0I4 1608 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 PLXNB3Q9ULL4 1909 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 BPTFQ12830 3046 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 CCL15-CCL14A0A0B4J2E2 113 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 A0A1W2PQF6 199 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 MYBPHLA2RUH7 354 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 MYO1GB0I1T2 1018 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 I6L893 689 aaPredicted RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 FXYD1O00168 92 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 PDHXO00330 501 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 HSPB6O14558 160 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 EI24O14681 340 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 INPP4BO15327 924 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 RHOBTB1O94844 696 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 OR2C1O95371 312 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 SNAI1O95863 264 aaPredicted RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 MOCS2O96007 188 aaPredicted RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 UMODP07911 640 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 ALOX5P09917 674 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 THRBP10828 461 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 ZNF8P17098 575 aaPredicted RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 CTPS1P17812 591 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 CCNA2P20248 432 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 TCEA1P23193 301 aaKnown RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 CD86P42081 329 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 MAGEA8P43361 318 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 CCR10P46092 362 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 ALDH3A2P51648 485 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 PLK1P53350 603 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 CLDN2P57739 230 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 PHEXP78562 749 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 EIF4EBP2Q13542 120 aaPredicted RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 ITGA7Q13683 1181 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 RNPS1Q15287 305 aaKnown RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 RBBP7Q16576 425 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 CCL15Q16663 113 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 UPP1Q16831 310 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 ZNF829Q3KNS6 432 aaPredicted RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 XKR7Q5GH72 579 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 GARNL3Q5VVW2 1013 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 CLEC6AQ6EIG7 209 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 METTL2BQ6P1Q9 378 aaKnown RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 KLHL35Q6PF15 583 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 C16orf87Q6PH81 154 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 IL27RAQ6UWB1 636 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 RNF165Q6ZSG1 346 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 GPRIN3Q6ZVF9 776 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 SLC46A3Q7Z3Q1 461 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 MFSD6LQ8IWD5 586 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 C8orf59Q8N0T1 100 aaPredicted RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 SFRP1Q8N474 314 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 CARNMT1Q8N4J0 409 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 DPP10Q8N608 796 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 TEX26Q8N6G2 289 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 ZNF555Q8NEP9 628 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 ACVR1CQ8NER5 493 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 TRPV3Q8NET8 790 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 CADM4Q8NFZ8 388 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 OR8J3Q8NGG0 315 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 OR13J1Q8NGT2 312 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 HMGCLL1Q8TB92 370 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 CANT1Q8WVQ1 401 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 S100ZQ8WXG8 99 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 NDRG1Q92597 394 aaKnown RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 SNAPC3Q92966 411 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 ABTB1Q969K4 478 aaPredicted RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 SLCO4A1Q96BD0 722 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 C12orf43Q96C57 262 aaKnown RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 INTS12Q96CB8 462 aaKnown RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 PABPC5Q96DU9 382 aaKnown RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 CEP295NLQ96MC4 621 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 CMTM3Q96MX0 182 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 ATOH8Q96SQ7 321 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 ZNF382Q96SR6 550 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 RBM4BQ9BQ04 359 aaKnown RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 RBM4Q9BWF3 364 aaKnown RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 SLC39A8Q9C0K1 460 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 MAGIXQ9H6Y5 334 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 NOL11Q9H8H0 719 aaKnown RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 ANKHQ9HCJ1 492 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 HMG20AQ9NP66 347 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 HPS4Q9NQG7 708 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 OLAHQ9NV23 265 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 RHBDL2Q9NX52 303 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 DUS2Q9NX74 493 aaKnown RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 UXTQ9UBK9 157 aaPredicted RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 SLC2A6Q9UGQ3 507 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 ZNF639Q9UID6 485 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 TRMT6Q9UJA5 497 aaKnown RBP4.72□□□□□ -1.65
LINC00458-202ENST00000427299 A4GNTQ9UNA3 340 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms