RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 MRPL28Q13084 256 aaKnown RBP12.62□□□□□ -0.39
USP42-203ENST00000426246 FAM46CQ5VWP2 391 aa12.62□□□□□ -0.39
USP42-203ENST00000426246 KHDRBS2Q5VWX1 349 aaKnown RBP12.62□□□□□ -0.39
USP42-203ENST00000426246 TBC1D3GQ6DHY5 549 aa12.62□□□□□ -0.39
USP42-203ENST00000426246 TBC1D3CQ6IPX1 549 aa12.62□□□□□ -0.39
USP42-203ENST00000426246 PNCKQ6P2M8 343 aa12.62□□□□□ -0.39
USP42-203ENST00000426246 TBC1D3Q8IZP1 549 aaPredicted RBP12.62□□□□□ -0.39
USP42-203ENST00000426246 HMGB4Q8WW32 186 aa12.62□□□□□ -0.39
USP42-203ENST00000426246 OR8D1Q8WZ84 308 aa12.62□□□□□ -0.39
USP42-203ENST00000426246 TIFAQ96CG3 184 aa12.62□□□□□ -0.39
USP42-203ENST00000426246 SECISBP2Q96T21 854 aaKnown RBP12.62□□□□□ -0.39
USP42-203ENST00000426246 CDCA3Q99618 268 aaPredicted RBP12.62□□□□□ -0.39
USP42-203ENST00000426246 CDCP1Q9H5V8 836 aa12.62□□□□□ -0.39
USP42-203ENST00000426246 HSPB11Q9Y547 144 aa12.62□□□□□ -0.39
USP42-203ENST00000426246 MEIOCA2RUB1 952 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 MMP11P24347 488 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 GRPRP30550 384 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 IFNA8P32881 189 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 CDH11P55287 796 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 HENMT1Q5T8I9 393 aaKnown RBP12.61□□□□□ -0.39
USP42-203ENST00000426246 IZUMO1Q8IYV9 350 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 ANKRD53Q8N9V6 530 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 CNDP2Q96KP4 475 aaKnown RBP12.61□□□□□ -0.39
USP42-203ENST00000426246 OPALINQ96PE5 141 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 FBXO8Q9NRD0 319 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 LRRC72A6NJI9 287 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 ELAVL4P26378 380 aaKnown RBP12.61□□□□□ -0.39
USP42-203ENST00000426246 SP140Q13342 867 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 BBS1Q8NFJ9 593 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 GPR32P1Q8NGA4 272 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 OR9A2Q8NGT5 310 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 ARRDC3Q96B67 414 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 MRPL38Q96DV4 380 aaKnown RBP12.61□□□□□ -0.39
USP42-203ENST00000426246 ZBED6CLQ96FA7 236 aaPredicted RBP12.61□□□□□ -0.39
USP42-203ENST00000426246 C6orf106Q9H6K1 298 aaPredicted RBP12.61□□□□□ -0.39
USP42-203ENST00000426246 GTF2A1LQ9UNN4 478 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 RPL36Q9Y3U8 105 aaKnown RBP12.61□□□□□ -0.39
USP42-203ENST00000426246 FCMRO60667 390 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 TIE1P35590 1138 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 ZNF45Q02386 682 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 P2RY14Q15391 338 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 ZNF181Q2M3W8 571 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 MLIPQ5VWP3 458 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 FIGNL1Q6PIW4 674 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 SLC9B2Q86UD5 537 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 NRMQ8IXM6 262 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 DENND6BQ8NEG7 585 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 OR6C4Q8NGE1 309 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 ADAMTS15Q8TE58 950 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 ORAI1Q96D31 301 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 BARHL1Q9BZE3 327 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 BHLHE41Q9C0J9 482 aaPredicted RBP12.61□□□□□ -0.39
USP42-203ENST00000426246 TRIM45Q9H8W5 580 aaPredicted RBP12.61□□□□□ -0.39
USP42-203ENST00000426246 HHATLQ9HCP6 504 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 GDE1Q9NZC3 331 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 HCN2Q9UL51 889 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 PADI2Q9Y2J8 665 aa12.61□□□□□ -0.39
USP42-203ENST00000426246 FAM171A2A8MVW0 826 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 HEPACAM2A8MVW5 462 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 SLC30A4O14863 429 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 OSMP13725 252 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 ZNF30P17039 623 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 MYL9P24844 172 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 IL12RB1P42701 662 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 CHRNEQ04844 493 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 SRSF5Q13243 272 aaKnown RBP12.6□□□□□ -0.39
USP42-203ENST00000426246 DEFB134Q4QY38 66 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 TANGO2Q6ICL3 276 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 VITQ6UXI7 678 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 GALNT13Q8IUC8 556 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 SHISA5Q8N114 240 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 Q8N402 240 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 C10orf53Q8N6V4 93 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 ZNF433Q8N7K0 673 aaPredicted RBP12.6□□□□□ -0.39
USP42-203ENST00000426246 MAPKAP1Q9BPZ7 522 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 C11orf54Q9H0W9 315 aaPredicted RBP12.6□□□□□ -0.39
USP42-203ENST00000426246 STARD5Q9NSY2 213 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 DZANK1Q9NVP4 752 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 CMAHPQ9Y471 501 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 NOX1Q9Y5S8 564 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 CAPN5O15484 640 aaPredicted RBP12.6□□□□□ -0.39
USP42-203ENST00000426246 PAHP00439 452 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 UQCRC2P22695 453 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 FCHO2Q0JRZ9 810 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 SGCGQ13326 291 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 GXYLT1Q4G148 440 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 ZNF544Q6NX49 715 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 UNC5DQ6UXZ4 953 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 ZER1Q7Z7L7 766 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 C11orf24Q96F05 449 aaPredicted RBP12.6□□□□□ -0.39
USP42-203ENST00000426246 KCTD7Q96MP8 289 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 GPA33Q99795 319 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 OBP2AQ9NY56 170 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 GSTK1Q9Y2Q3 226 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 OR2W5A6NFC9 320 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 SRPRAP08240 638 aaKnown RBP12.6□□□□□ -0.39
USP42-203ENST00000426246 CD72P21854 359 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 AK4P27144 223 aaPredicted RBP12.6□□□□□ -0.39
USP42-203ENST00000426246 XCR1P46094 333 aa12.6□□□□□ -0.39
USP42-203ENST00000426246 PRLHRP49683 370 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms