RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 NUP54Q7Z3B4 507 aa17.18■□□□□ 0.34
PRNP-202ENST00000424424 SLC34A3Q8N130 599 aa17.18■□□□□ 0.34
PRNP-202ENST00000424424 FAM109AQ8N4B1 249 aa17.18■□□□□ 0.34
PRNP-202ENST00000424424 GOLGA6L1Q8N7Z2 621 aa17.18■□□□□ 0.34
PRNP-202ENST00000424424 OR52N2Q8NGI0 321 aa17.18■□□□□ 0.34
PRNP-202ENST00000424424 RAB3IL1Q8TBN0 382 aa17.18■□□□□ 0.34
PRNP-202ENST00000424424 SPPL2AQ8TCT8 520 aa17.18■□□□□ 0.34
PRNP-202ENST00000424424 OMA1Q96E52 524 aa17.18■□□□□ 0.34
PRNP-202ENST00000424424 BTBD9Q96Q07 612 aa17.18■□□□□ 0.34
PRNP-202ENST00000424424 SORT1Q99523 831 aa17.18■□□□□ 0.34
PRNP-202ENST00000424424 PRPF18Q99633 342 aaKnown RBP17.18■□□□□ 0.34
PRNP-202ENST00000424424 C1orf50Q9BV19 199 aa17.18■□□□□ 0.34
PRNP-202ENST00000424424 DEFB127Q9H1M4 99 aa17.18■□□□□ 0.34
PRNP-202ENST00000424424 FOLH1BQ9HBA9 442 aa17.18■□□□□ 0.34
PRNP-202ENST00000424424 SUCOQ9UBS9 1254 aaKnown RBP17.18■□□□□ 0.34
PRNP-202ENST00000424424 HAO1Q9UJM8 370 aa17.18■□□□□ 0.34
PRNP-202ENST00000424424 CNOT11Q9UKZ1 510 aaKnown RBP17.18■□□□□ 0.34
PRNP-202ENST00000424424 C19orf53Q9UNZ5 99 aaPredicted RBP17.18■□□□□ 0.34
PRNP-202ENST00000424424 HIVEP3Q5T1R4 2406 aa17.18■□□□□ 0.34
PRNP-202ENST00000424424 RELNP78509 3460 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 POLEQ07864 2286 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 TO15178 435 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 GLSO94925 669 aaPredicted RBP17.17■□□□□ 0.34
PRNP-202ENST00000424424 SNX4O95219 450 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 LDLRP01130 860 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 ABCB1P08183 1280 aaPredicted RBP17.17■□□□□ 0.34
PRNP-202ENST00000424424 IFI6P09912 130 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 ZNF155Q12901 538 aaPredicted RBP17.17■□□□□ 0.34
PRNP-202ENST00000424424 HSPB3Q12988 150 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 HYAL4Q2M3T9 481 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 CMPK2Q5EBM0 449 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 MTFR2Q6P444 385 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 ARHGAP11AQ6P4F7 1023 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 Q6ZPB1 254 aaPredicted RBP17.17■□□□□ 0.34
PRNP-202ENST00000424424 NATD1Q8N6N6 113 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 CIDECQ96AQ7 238 aaPredicted RBP17.17■□□□□ 0.34
PRNP-202ENST00000424424 ELP4Q96EB1 424 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 PPP1R36Q96LQ0 422 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 JSRP1Q96MG2 331 aaPredicted RBP17.17■□□□□ 0.34
PRNP-202ENST00000424424 VSTM2LQ96N03 204 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 ZFP64Q9NPA5 681 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 ACSS1Q9NUB1 689 aaPredicted RBP17.17■□□□□ 0.34
PRNP-202ENST00000424424 ATAD3AQ9NVI7 634 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 THAP1Q9NVV9 213 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 NOP53Q9NZM5 478 aaKnown RBP17.17■□□□□ 0.34
PRNP-202ENST00000424424 B4GALT7Q9UBV7 327 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 SH3BGRL2Q9UJC5 107 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 MAPRE3Q9UPY8 281 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 ZNF835Q9Y2P0 537 aa17.17■□□□□ 0.34
PRNP-202ENST00000424424 COL12A1Q99715 3063 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 A0A1B0GTH9 108 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 WIPF3A6NGB9 483 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 CCL21O00585 134 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 PRRG2O14669 202 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 SCAMP2O15127 329 aaKnown RBP17.16■□□□□ 0.34
PRNP-202ENST00000424424 ABCB7O75027 752 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 REM1O75628 298 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 PDE9AO76083 593 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 CT45A8P0DMV1 189 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 CT45A9P0DMV2 189 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 ESRRAP11474 423 aaPredicted RBP17.16■□□□□ 0.34
PRNP-202ENST00000424424 PTGS2P35354 604 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 HSF1Q00613 529 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 EMX2Q04743 252 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 FOXO1Q12778 655 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 SLC10A1Q14973 349 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 ZNHIT3Q15649 155 aaPredicted RBP17.16■□□□□ 0.34
PRNP-202ENST00000424424 ZNF385BQ569K4 471 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 CT45A2Q5DJT8 189 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 ZNF551Q7Z340 670 aaPredicted RBP17.16■□□□□ 0.34
PRNP-202ENST00000424424 PACS2Q86VP3 889 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 EID3Q8N140 333 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 OR2L13Q8N349 312 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 TMEM251Q8N6I4 163 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 TMCO6Q96DC7 493 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 ZNF597Q96LX8 424 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 ANGPTL4Q9BY76 406 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 METTL7AQ9H8H3 244 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 ZDHHC11Q9H8X9 412 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 ATP6V1HQ9UI12 483 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 OR10H1Q9Y4A9 318 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 DOPEY2Q9Y3R5 2298 aa17.16■□□□□ 0.34
PRNP-202ENST00000424424 FLNCQ14315 2725 aa17.15■□□□□ 0.34
PRNP-202ENST00000424424 OR6C70A6NIJ9 312 aa17.15■□□□□ 0.34
PRNP-202ENST00000424424 UPK1AO00322 258 aa17.15■□□□□ 0.34
PRNP-202ENST00000424424 PRPS1L1P21108 318 aa17.15■□□□□ 0.34
PRNP-202ENST00000424424 IL12BP29460 328 aa17.15■□□□□ 0.34
PRNP-202ENST00000424424 CASP3P42574 277 aa17.15■□□□□ 0.34
PRNP-202ENST00000424424 FRKP42685 505 aaPredicted RBP17.15■□□□□ 0.34
PRNP-202ENST00000424424 MAGEA5P43359 124 aa17.15■□□□□ 0.34
PRNP-202ENST00000424424 MASP1P48740 699 aa17.15■□□□□ 0.34
PRNP-202ENST00000424424 PTGR1Q14914 329 aa17.15■□□□□ 0.34
PRNP-202ENST00000424424 C3AR1Q16581 482 aa17.15■□□□□ 0.34
PRNP-202ENST00000424424 CPTPQ5TA50 214 aa17.15■□□□□ 0.34
PRNP-202ENST00000424424 SLC44A2Q8IWA5 706 aaPredicted RBP17.15■□□□□ 0.34
PRNP-202ENST00000424424 CEP70Q8NHQ1 597 aa17.15■□□□□ 0.34
PRNP-202ENST00000424424 TMBIM1Q969X1 311 aa17.15■□□□□ 0.34
PRNP-202ENST00000424424 ARL8AQ96BM9 186 aa17.15■□□□□ 0.34
PRNP-202ENST00000424424 ATP6V1G3Q96LB4 118 aa17.15■□□□□ 0.34
PRNP-202ENST00000424424 RILPQ96NA2 401 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms