RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 RYDENQ9NUL5 291 aaKnown RBP13.92□□□□□ -0.18
USB1-202ENST00000423271 ZNF639Q9UID6 485 aa13.92□□□□□ -0.18
USB1-202ENST00000423271 UTS2RQ9UKP6 389 aa13.92□□□□□ -0.18
USB1-202ENST00000423271 DLGAP4Q9Y2H0 992 aa13.92□□□□□ -0.18
USB1-202ENST00000423271 MED12Q93074 2177 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 A0A0G2JNJ9 132 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 ANKRD33BA6NCL7 494 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 NPHS1O60500 1241 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 TOXO94900 526 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 CHRNGP07510 517 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 ARRB2P32121 409 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 ADH7P40394 386 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 TMED10P49755 219 aaKnown RBP13.91□□□□□ -0.18
USB1-202ENST00000423271 KRTAP10-9P60411 292 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 TBCELQ5QJ74 424 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 C1orf185Q5T7R7 199 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 WLSQ5T9L3 541 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 CES4AQ5XG92 561 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 OR52R1Q8NGF1 315 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 OR10Q1Q8NGQ4 319 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 OR6Y1Q8NGX8 325 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 NEIL3Q8TAT5 605 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 CTHRC1Q96CG8 243 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 TREX2Q9BQ50 279 aaPredicted RBP13.91□□□□□ -0.18
USB1-202ENST00000423271 TRMOQ9BU70 441 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 EBPLQ9BY08 206 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 ANGPTL4Q9BY76 406 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 ANKRA2Q9H9E1 313 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 ACKR4Q9NPB9 350 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 PFDN4Q9NQP4 134 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 QPCTLQ9NXS2 382 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 ALKBH4Q9NXW9 302 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 EHD3Q9NZN3 535 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 B4GALT7Q9UBV7 327 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 Q9UFV3 132 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 ZNF780BQ9Y6R6 833 aa13.91□□□□□ -0.18
USB1-202ENST00000423271 TEP1Q99973 2627 aaKnown RBP13.9□□□□□ -0.18
USB1-202ENST00000423271 GNG14A0A1W2PPG7 69 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 H3BQF6 201 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 BIRC5O15392 142 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 WDR1O75083 606 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 NME6O75414 186 aaPredicted RBP13.9□□□□□ -0.18
USB1-202ENST00000423271 CRCPO75575 148 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 PPM1BO75688 479 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 ABCB1P08183 1280 aaPredicted RBP13.9□□□□□ -0.18
USB1-202ENST00000423271 IGFBP2P18065 325 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 TIA1P31483 386 aaKnown RBP eCLIP13.9□□□□□ -0.18
USB1-202ENST00000423271 CASP3P42574 277 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 WDR4P57081 412 aaKnown RBP13.9□□□□□ -0.18
USB1-202ENST00000423271 BTKQ06187 659 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 ACSM2AQ08AH3 577 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 SPIN4Q56A73 249 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 ZNF628Q5EBL2 1059 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 ARL13AQ5H913 290 aaPredicted RBP13.9□□□□□ -0.18
USB1-202ENST00000423271 HHATQ5VTY9 493 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 TMEM198Q66K66 360 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 ACSM2BQ68CK6 577 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 CLEC6AQ6EIG7 209 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 CCDC116Q8IYX3 515 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 LIX1Q8N485 282 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 GBP7Q8N8V2 638 aaPredicted RBP13.9□□□□□ -0.18
USB1-202ENST00000423271 OR9A2Q8NGT5 310 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 PPP1R14CQ8TAE6 165 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 MGARPQ8TDB4 240 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 C16orf78Q8WTQ4 265 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 HGDQ93099 445 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 EXOSC8Q96B26 276 aaKnown RBP13.9□□□□□ -0.18
USB1-202ENST00000423271 C11orf24Q96F05 449 aaPredicted RBP13.9□□□□□ -0.18
USB1-202ENST00000423271 ATP6V1G3Q96LB4 118 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 NODALQ96S42 347 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 SECISBP2Q96T21 854 aaKnown RBP13.9□□□□□ -0.18
USB1-202ENST00000423271 PAIP2Q9BPZ3 127 aaKnown RBP13.9□□□□□ -0.18
USB1-202ENST00000423271 UBQLN3Q9H347 655 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 KCNJ16Q9NPI9 418 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 ZNF446Q9NWS9 450 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 PSME2Q9UL46 239 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 CFL2Q9Y281 166 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 C15orf41Q9Y2V0 281 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 ARHGAP21Q5T5U3 1957 aa13.9□□□□□ -0.18
USB1-202ENST00000423271 C15orf38-AP3S2A0A0A6YYH1 394 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 GNB5O14775 395 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 AZIN1O14977 448 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 SNX4O95219 450 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 BGNP21810 368 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 MSX1P28360 303 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 SSTR2P30874 369 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 MASP1P48740 699 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 EMDP50402 254 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 PLCXD2Q0VAA5 305 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 CHI3L2Q15782 390 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 LIX1LQ8IVB5 337 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 ULK2Q8IYT8 1036 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 KAT2AQ92830 837 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 NTNG2Q96CW9 530 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 OMA1Q96E52 524 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 C14orf79Q96F83 325 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 LCORQ96JN0 433 aaPredicted RBP13.89□□□□□ -0.19
USB1-202ENST00000423271 GNRHR2Q96P88 292 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 FIS1Q9Y3D6 152 aa13.89□□□□□ -0.19
USB1-202ENST00000423271 KDM4EB2RXH2 506 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms