RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 MFAP5Q13361 173 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 GTDC1Q4AE62 458 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 COQ5Q5HYK3 327 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 EXOSC6Q5RKV6 272 aaKnown RBP15.72■□□□□ 0.11
COL7A1-202ENST00000422991 ABHD17BQ5VST6 288 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 SAXO2Q658L1 398 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 FAM91A1Q658Y4 838 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 BHLHB9Q6PI77 547 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 NPSR1Q6W5P4 371 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 ZNF621Q6ZSS3 439 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 BEST3Q8N1M1 668 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 POU5F2Q8N7G0 328 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 SLC39A7Q92504 469 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 TP53INP1Q96A56 240 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 NEURL3Q96EH8 262 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 LCORQ96JN0 433 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-202ENST00000422991 LMF2Q9BU23 707 aaKnown RBP15.72■□□□□ 0.11
COL7A1-202ENST00000422991 NXF5Q9H1B4 397 aaKnown RBP15.72■□□□□ 0.11
COL7A1-202ENST00000422991 ADNPQ9H2P0 1102 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 TUBD1Q9UJT1 453 aa15.72■□□□□ 0.11
COL7A1-202ENST00000422991 GPR55Q9Y2T6 319 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-202ENST00000422991 TRBV5-3A0A0A0MS03 114 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 FRG2CA6NGY1 282 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 TTC36A6NLP5 189 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 ITGA10O75578 1167 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 KCNH1O95259 989 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 ANP32DO95626 131 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 FAM87AP0C7U9 286 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 CT45A8P0DMV1 189 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 CT45A9P0DMV2 189 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 ACP2P11117 423 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 DRD5P21918 477 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 CHI3L1P36222 383 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-202ENST00000422991 PRIM2P49643 509 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 NR0B1P51843 470 aaKnown RBP15.71■□□□□ 0.11
COL7A1-202ENST00000422991 CYLC2Q14093 348 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-202ENST00000422991 LASP1Q14847 261 aaKnown RBP15.71■□□□□ 0.11
COL7A1-202ENST00000422991 NNATQ16517 81 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 CT45A2Q5DJT8 189 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 PIGGQ5H8A4 983 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 REP15Q6BDI9 236 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 ZCCHC12Q6PEW1 402 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 IGFL2Q6UWQ7 119 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 DLEU7Q6UYE1 221 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 LINC00696Q6ZRV3 163 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 C6orf120Q7Z4R8 191 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 WDR53Q7Z5U6 358 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-202ENST00000422991 DHDDSQ86SQ9 333 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 MSRB3Q8IXL7 192 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 CDRT4Q8N9R6 151 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 RP9Q8TA86 221 aaKnown RBP15.71■□□□□ 0.11
COL7A1-202ENST00000422991 FBXO30Q8TB52 745 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 C16orf58Q96GQ5 468 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 SLC35G5Q96KT7 338 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 LMF1Q96S06 567 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 RASL10BQ96S79 203 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 ARHGAP9Q9BRR9 750 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 ACTRT3Q9BYD9 372 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 SLC25A37Q9NYZ2 338 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 SLAMF8Q9P0V8 285 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 YARS2Q9Y2Z4 477 aaKnown RBP15.71■□□□□ 0.11
COL7A1-202ENST00000422991 PCDHB14Q9Y5E9 798 aa15.71■□□□□ 0.11
COL7A1-202ENST00000422991 LOC100653049A0A140TA62 436 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 MRASO14807 208 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 ACOX3O15254 700 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 ZNF354AO60765 605 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-202ENST00000422991 KRT34O76011 436 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 C1QCP02747 245 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 KRT16P08779 473 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 PRDX6P30041 224 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 TRHRP34981 398 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-202ENST00000422991 SSR4P51571 173 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 RPS26P62854 115 aaKnown RBP15.7■□□□□ 0.1
COL7A1-202ENST00000422991 PSG6Q00889 435 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 STX5Q13190 355 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 ZNHIT3Q15649 155 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-202ENST00000422991 CDC73Q6P1J9 531 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 PCSK4Q6UW60 755 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 SLC15A4Q8N697 577 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 FITM2Q8N6M3 262 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 SLC16A11Q8NCK7 471 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 DNAJB8Q8NHS0 232 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 SLC22A8Q8TCC7 542 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 MIPOL1Q8TD10 442 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 ZFP90Q8TF47 636 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 HSPBAP1Q96EW2 488 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 AURKBQ96GD4 344 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-202ENST00000422991 ABHD17AQ96GS6 310 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 YIPF4Q9BSR8 244 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 RNF32Q9H0A6 362 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 SERHL2Q9H4I8 314 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 ZBTB20Q9HC78 741 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-202ENST00000422991 RYDENQ9NUL5 291 aaKnown RBP15.7■□□□□ 0.1
COL7A1-202ENST00000422991 STMN3Q9NZ72 180 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 ABI3Q9P2A4 366 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 MAP10Q9P2G4 905 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 PCDHGB7Q9Y5F8 929 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 ATRXP46100 2492 aa15.7■□□□□ 0.1
COL7A1-202ENST00000422991 TO15178 435 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 NKX2-2O95096 273 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms