RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 FAM9CQ8IZT9 166 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 CNPY4Q8N129 248 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 C17orf47Q8NEP4 570 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 OR14L1PQ8NHC6 308 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 EPS8L3Q8TE67 593 aaKnown RBP8.49□□□□□ -1.05
NUP50-206ENST00000422489 HGDQ93099 445 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 ABTB1Q969K4 478 aaPredicted RBP8.49□□□□□ -1.05
NUP50-206ENST00000422489 C14orf79Q96F83 325 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 TMEM41AQ96HV5 264 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 TRIB1Q96RU8 372 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 ADOQ96SZ5 270 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 ZNF559Q9BR84 538 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 OSBPL11Q9BXB4 747 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 MCCC2Q9HCC0 563 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 GALNT9Q9HCQ5 603 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 SERHLQ9NQF3 203 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 MIEF1Q9NQG6 463 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 RRAGDQ9NQL2 400 aaPredicted RBP8.49□□□□□ -1.05
NUP50-206ENST00000422489 NPDC1Q9NQX5 325 aaPredicted RBP8.49□□□□□ -1.05
NUP50-206ENST00000422489 GPR55Q9Y2T6 319 aaPredicted RBP8.49□□□□□ -1.05
NUP50-206ENST00000422489 FIS1Q9Y3D6 152 aa8.49□□□□□ -1.05
NUP50-206ENST00000422489 POLR3HQ9Y535 204 aaPredicted RBP8.49□□□□□ -1.05
NUP50-206ENST00000422489 MYO7BQ6PIF6 2116 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 NBPF19A0A087WUL8 3843 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 SERTM1A2A2V5 107 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 PRAMEF25A6NGN4 478 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 KDM4EB2RXH2 506 aaPredicted RBP8.48□□□□□ -1.05
NUP50-206ENST00000422489 TO15178 435 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 ERN1O75460 977 aaKnown RBP8.48□□□□□ -1.05
NUP50-206ENST00000422489 CBR3O75828 277 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 EPPINO95925 133 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 IL2RAP01589 272 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 JUNP05412 331 aaKnown RBP8.48□□□□□ -1.05
NUP50-206ENST00000422489 UROSP10746 265 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 KRT4P19013 534 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 CAPN3P20807 821 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 BMP5P22003 454 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 TCEA1P23193 301 aaKnown RBP8.48□□□□□ -1.05
NUP50-206ENST00000422489 MSX1P28360 303 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 PTPN6P29350 595 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 IL12BP29460 328 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 UQCRC1P31930 480 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 NCBP2P52298 156 aaKnown RBP eCLIP8.48□□□□□ -1.05
NUP50-206ENST00000422489 AGFG1P52594 562 aaKnown RBP8.48□□□□□ -1.05
NUP50-206ENST00000422489 CORO7P57737 925 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 DNAJB13P59910 316 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 SRYQ05066 204 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 TFF3Q07654 80 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 CRYZQ08257 329 aaKnown RBP8.48□□□□□ -1.05
NUP50-206ENST00000422489 SNTA1Q13424 505 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 SF3B4Q15427 424 aaKnown RBP eCLIP8.48□□□□□ -1.054e-8■■■■■ 40.5
NUP50-206ENST00000422489 PRSS53Q2L4Q9 553 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 FNDC7Q5VTL7 733 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 CES4AQ5XG92 561 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 VASNQ6EMK4 673 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 OR5M10Q6IEU7 315 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 NOXRED1Q6NXP6 359 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 GALNT18Q6P9A2 607 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 SH2D5Q6ZV89 423 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 LARP4Q71RC2 724 aaKnown RBP eCLIP8.48□□□□□ -1.05
NUP50-206ENST00000422489 C10orf107Q8IVU9 208 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 DMRTC2Q8IXT2 367 aaPredicted RBP8.48□□□□□ -1.05
NUP50-206ENST00000422489 PM20D2Q8IYS1 436 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 EIF1ADQ8N9N8 165 aaKnown RBP8.48□□□□□ -1.05
NUP50-206ENST00000422489 TNIP2Q8NFZ5 429 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 OR2W6PQ8NHA6 318 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 ZNF675Q8TD23 568 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 UGT2B28Q9BY64 529 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 IQCGQ9H095 443 aaKnown RBP8.48□□□□□ -1.05
NUP50-206ENST00000422489 UBQLN3Q9H347 655 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 FOLH1BQ9HBA9 442 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 OXSMQ9NWU1 459 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 TAS2R9Q9NYW1 312 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 EXO1Q9UQ84 846 aaKnown RBP8.48□□□□□ -1.05
NUP50-206ENST00000422489 OR10H1Q9Y4A9 318 aa8.48□□□□□ -1.05
NUP50-206ENST00000422489 FRG2CA6NGY1 282 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 OR6C70A6NIJ9 312 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 MYO1GB0I1T2 1018 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 H3BQF6 201 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 SLC28A1O00337 649 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 DVL2O14641 736 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 RGS14O43566 566 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 ZWINTO95229 277 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 DDCP20711 480 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 PTGDSP41222 190 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 RFX3P48380 749 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 STARP49675 285 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 DLX5P56178 289 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 NAA20P61599 178 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 IFFO1Q0D2I5 559 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 ZNF763Q0D2J5 394 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 ZNF155Q12901 538 aaPredicted RBP8.47□□□□□ -1.05
NUP50-206ENST00000422489 EFR3AQ14156 821 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 SLC25A35Q3KQZ1 300 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 ACSF3Q4G176 576 aaPredicted RBP8.47□□□□□ -1.05
NUP50-206ENST00000422489 CLEC6AQ6EIG7 209 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 FAM71E1Q6IPT2 247 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 ARSKQ6UWY0 536 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 TMEM107Q6UX40 140 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 FRMD7Q6ZUT3 714 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms