RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 CD79BP40259 229 aa12.87□□□□□ -0.35
NFE4-201ENST00000420058 DIO3P55073 304 aa12.87□□□□□ -0.35
NFE4-201ENST00000420058 EEF1A1P68104 462 aaKnown RBP12.87□□□□□ -0.35
NFE4-201ENST00000420058 EEF1A1P5Q5VTE0 462 aa12.87□□□□□ -0.35
NFE4-201ENST00000420058 NUDT13Q86X67 352 aa12.87□□□□□ -0.35
NFE4-201ENST00000420058 MYLK4Q86YV6 388 aaPredicted RBP12.87□□□□□ -0.35
NFE4-201ENST00000420058 PLCZ1Q86YW0 608 aa12.87□□□□□ -0.35
NFE4-201ENST00000420058 CENPLQ8N0S6 344 aaPredicted RBP12.87□□□□□ -0.35
NFE4-201ENST00000420058 LRRN4CLQ8ND94 238 aa12.87□□□□□ -0.35
NFE4-201ENST00000420058 PYROXD1Q8WU10 500 aa12.87□□□□□ -0.35
NFE4-201ENST00000420058 RNF138Q8WVD3 245 aa12.87□□□□□ -0.35
NFE4-201ENST00000420058 LCORQ96JN0 433 aaPredicted RBP12.87□□□□□ -0.35
NFE4-201ENST00000420058 CCL19Q99731 98 aa12.87□□□□□ -0.35
NFE4-201ENST00000420058 REPIN1Q9BWE0 567 aaKnown RBP12.87□□□□□ -0.35
NFE4-201ENST00000420058 OPN3Q9H1Y3 402 aaPredicted RBP12.87□□□□□ -0.35
NFE4-201ENST00000420058 ACBD3Q9H3P7 528 aa12.87□□□□□ -0.35
NFE4-201ENST00000420058 ACTR8Q9H981 624 aa12.87□□□□□ -0.35
NFE4-201ENST00000420058 DLGAP4Q9Y2H0 992 aa12.87□□□□□ -0.35
NFE4-201ENST00000420058 MRPS18CQ9Y3D5 142 aaKnown RBP12.87□□□□□ -0.35
NFE4-201ENST00000420058 PRAMEF25A6NGN4 478 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 TO15178 435 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 UGDHO60701 494 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 CRLF1O75462 422 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 CRHP06850 196 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 KLK1P06870 262 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 LTA4HP09960 611 aaKnown RBP12.86□□□□□ -0.35
NFE4-201ENST00000420058 CTAGE8P0CG41 777 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 DRD5P21918 477 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 SRD5A2P31213 254 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 CPOXP36551 454 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 PTH2RP49190 550 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 EMDP50402 254 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 GAS1P54826 345 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 MRPS25P82663 173 aaKnown RBP12.86□□□□□ -0.35
NFE4-201ENST00000420058 BCL2A1Q16548 175 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 TRMT12Q53H54 448 aaKnown RBP12.86□□□□□ -0.35
NFE4-201ENST00000420058 OR5M10Q6IEU7 315 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 ZNF550Q7Z398 422 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 GRAMD2AQ8IUY3 354 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 CTAGE4Q8IX94 777 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 ADCY4Q8NFM4 1077 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 GPR78Q96P69 363 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 IPPKQ9H8X2 491 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 ANK2Q01484 3957 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 PCNX3Q9H6A9 2034 aa12.86□□□□□ -0.35
NFE4-201ENST00000420058 SVEP1Q4LDE5 3571 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 HMX2A2RU54 273 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 EFCAB8A8MWE9 144 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 H0YC42 278 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 OR7A17O14581 309 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 ACOX3O15254 700 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 KLF4O43474 513 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 NME6O75414 186 aaPredicted RBP12.85□□□□□ -0.35
NFE4-201ENST00000420058 SMNDC1O75940 238 aaKnown RBP eCLIP12.85□□□□□ -0.35
NFE4-201ENST00000420058 SEMA3DO95025 777 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 SIX3O95343 332 aaPredicted RBP12.85□□□□□ -0.35
NFE4-201ENST00000420058 ATP1B1P05026 303 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 THBDP07204 575 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 KRT15P19012 456 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 SPRP35270 261 aaPredicted RBP12.85□□□□□ -0.35
NFE4-201ENST00000420058 FEN1P39748 380 aaKnown RBP12.85□□□□□ -0.35
NFE4-201ENST00000420058 PPICP45877 212 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 TPD52P55327 224 aaPredicted RBP12.85□□□□□ -0.35
NFE4-201ENST00000420058 PPP2R2BQ00005 443 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 IRF9Q00978 393 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 GTF2H2Q13888 395 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 PFKFB4Q16877 469 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 KBTBD12Q3ZCT8 623 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 GRTP1Q5TC63 336 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 SLC48A1Q6P1K1 146 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 GTF2H2CQ6P1K8 395 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 C20orf204Q6ZNR8 217 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 C3orf62Q6ZUJ4 267 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 GOLGA7Q7Z5G4 137 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 IFNEQ86WN2 208 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 RHEBL1Q8TAI7 183 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 KCTD4Q8WVF5 259 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 FIG4Q92562 907 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 TMBIM1Q969X1 311 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 REPS1Q96D71 796 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 PGM2Q96G03 612 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 ZNF681Q96N22 645 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 CDK15Q96Q40 435 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 SERPINI1Q99574 410 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 MRPL1Q9BYD6 325 aaKnown RBP12.85□□□□□ -0.35
NFE4-201ENST00000420058 SAYSD1Q9NPB0 183 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 ZNF701Q9NV72 531 aaPredicted RBP12.85□□□□□ -0.35
NFE4-201ENST00000420058 ZNF226Q9NYT6 803 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 KLRF1Q9NZS2 232 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 BCAP29Q9UHQ4 241 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 GPR55Q9Y2T6 319 aaPredicted RBP12.85□□□□□ -0.35
NFE4-201ENST00000420058 ACOT9Q9Y305 439 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 PLLPQ9Y342 182 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 PCDHA9Q9Y5H5 950 aa12.85□□□□□ -0.35
NFE4-201ENST00000420058 OR6C70A6NIJ9 312 aa12.84□□□□□ -0.35
NFE4-201ENST00000420058 TSPAN2O60636 221 aa12.84□□□□□ -0.35
NFE4-201ENST00000420058 SOX30O94993 753 aa12.84□□□□□ -0.35
NFE4-201ENST00000420058 TCP1P17987 556 aaKnown RBP12.84□□□□□ -0.35
NFE4-201ENST00000420058 CRABP2P29373 138 aa12.84□□□□□ -0.35
NFE4-201ENST00000420058 GCKP35557 465 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms