RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 KLHL4Q9C0H6 718 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 SERHL2Q9H4I8 314 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 Q9H521 79 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 CXorf21Q9HAI6 301 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 Q9N2J8 555 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 DUSP22Q9NRW4 184 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 AGPAT4Q9NRZ5 378 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 LANCL2Q9NS86 450 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 NTMQ9P121 344 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 KIF17Q9P2E2 1029 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 IFT80Q9P2H3 777 aaPredicted RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 CTSFQ9UBX1 484 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 PRODH2Q9UF12 536 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 C19orf25Q9UFG5 118 aaPredicted RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 C19orf53Q9UNZ5 99 aaPredicted RBP5.57□□□□□ -1.52
HMGB3-202ENST00000419110 SATB2Q9UPW6 733 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 ERVK-19Q9WJR5 959 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 CFL2Q9Y281 166 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 SLC9A8Q9Y2E8 581 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 PADI2Q9Y2J8 665 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 C15orf41Q9Y2V0 281 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 LOXL2Q9Y4K0 774 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 PCDHGB3Q9Y5G1 929 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 MPDZO75970 2070 aa5.57□□□□□ -1.52
HMGB3-202ENST00000419110 CPAMD8Q8IZJ3 1885 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 WDR87Q6ZQQ6 2873 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 CCDC187A0A096LP49 1063 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 IGKV3D-11A0A0A0MRZ8 115 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 C4orf47A7E2U8 309 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 C17orf105B2RV13 164 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 TGFBR3LH3BV60 316 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 AGRPO00253 132 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 UPK1AO00322 258 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 GNGT2O14610 69 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 CDX4O14627 284 aaPredicted RBP5.56□□□□□ -1.52
HMGB3-202ENST00000419110 ADAMDEC1O15204 470 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 PEX1O43933 1283 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 KIAA0513O60268 411 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 CSO75390 466 aaKnown RBP5.56□□□□□ -1.52
HMGB3-202ENST00000419110 MT-ND1P03886 318 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 HEXBP07686 556 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 ACP2P11117 423 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 ETS2P15036 469 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 TNNI3P19429 210 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 ATP6V1C1P21283 382 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 MAGEA2P43356 314 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 PSPHP78330 225 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 POU6F2P78424 691 aaPredicted RBP5.56□□□□□ -1.52
HMGB3-202ENST00000419110 MC2RQ01718 297 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 RHAGQ02094 409 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 EEF1A2Q05639 463 aaKnown RBP5.56□□□□□ -1.52
HMGB3-202ENST00000419110 ZFP36L1Q07352 338 aaKnown RBP5.56□□□□□ -1.52
HMGB3-202ENST00000419110 FUT5Q11128 374 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 TCF15Q12870 199 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 COL9A2Q14055 689 aaPredicted RBP5.56□□□□□ -1.52
HMGB3-202ENST00000419110 EXOSC7Q15024 291 aaKnown RBP5.56□□□□□ -1.52
HMGB3-202ENST00000419110 TAF11Q15544 211 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 CRB2Q5IJ48 1285 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 DCST2Q5T1A1 773 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 FHL5Q5TD97 284 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 PWWP2BQ6NUJ5 590 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 RNF111Q6ZNA4 994 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 DBX2Q6ZNG2 339 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 MED25Q71SY5 747 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 COX15Q7KZN9 410 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 CYP4Z1Q86W10 505 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 ZDHHC21Q8IVQ6 265 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 PEX5LQ8IYB4 626 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 PRSS58Q8IYP2 241 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 TAGAPQ8N103 731 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 SVOPLQ8N434 492 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 MEIOBQ8N635 442 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 FAM86B1Q8N7N1 296 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 BMPERQ8N8U9 685 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 ANKFN1Q8N957 763 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 PAPD5Q8NDF8 572 aaKnown RBP5.56□□□□□ -1.52
HMGB3-202ENST00000419110 OR7G1Q8NGA0 311 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 OR52R1Q8NGF1 315 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 NETO1Q8TDF5 533 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 GPR151Q8TDV0 419 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 SLC38A5Q8WUX1 472 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.56□□□□□ -1.52
HMGB3-202ENST00000419110 XAGE5Q8WWM1 108 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 METTL21AQ8WXB1 218 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 DNAJC9Q8WXX5 260 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 LRTOMTQ8WZ04 291 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 CDS1Q92903 461 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 DAZLQ92904 295 aaKnown RBP5.56□□□□□ -1.52
HMGB3-202ENST00000419110 TSLPQ969D9 159 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 SLCO4A1Q96BD0 722 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 GIMAP5Q96F15 307 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 OTUB1Q96FW1 271 aaPredicted RBP5.56□□□□□ -1.52
HMGB3-202ENST00000419110 PTCHD1Q96NR3 888 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 COL21A1Q96P44 957 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 TRNT1Q96Q11 434 aaKnown RBP5.56□□□□□ -1.52
HMGB3-202ENST00000419110 TREX2Q9BQ50 279 aaPredicted RBP5.56□□□□□ -1.52
HMGB3-202ENST00000419110 ZPBPQ9BS86 351 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 YIPF4Q9BSR8 244 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 LRFN3Q9BTN0 628 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms