RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 MACROD2A1Z1Q3 448 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 TNFSF11O14788 317 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 HDAC3O15379 428 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 VEGFDO43915 354 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 ATP6V1G1O75348 118 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 ECDO95905 644 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 HOXB7P09629 217 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 CT45A10P0DMU9 189 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 MARCKSP29966 332 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 SGSHP51688 502 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 TEFQ10587 303 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 KIAA0040Q15053 153 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 ISXQ2M1V0 245 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 C10orf53Q8N6V4 93 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 KRT35Q92764 455 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 FAF2Q96CS3 445 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 C11orf24Q96F05 449 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 C9orf85Q96MD7 179 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 ABCG4Q9H172 646 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 PDFQ9HBH1 243 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 COPS7AQ9UBW8 275 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 ENTPD4Q9Y227 616 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 SLC9A8Q9Y2E8 581 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 NTNG1Q9Y2I2 539 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 GPRASP1Q5JY77 1395 aa3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 RAI1Q7Z5J4 1906 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P49-201ENST00000418882 TMEM89A2RUT3 159 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 MFSD2BA6NFX1 497 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 EPOPA6NHQ4 379 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 ZFP92A6NM28 416 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 FAM220BPB1ANY3 271 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 G3V3Y1 287 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 SLC17A2O00624 439 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 EI24O14681 340 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 CHEK1O14757 476 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 LATO43561 262 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 NUDT21O43809 227 aaKnown RBP3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 SDC3O75056 442 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 SYNGR4O95473 234 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 ZMYM6O95789 1325 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 DRD3P35462 400 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 KRTAP13-3Q3SY46 172 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 CMPK2Q5EBM0 449 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 HIST2H2AA3Q6FI13 130 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 Q6ZVH6 145 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 AMZ2Q86W34 360 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 OR8H1Q8NGG4 311 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 OR13F1Q8NGS4 319 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 TMEM37Q8WXS4 190 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 TMEM45BQ96B21 275 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 DNAJA3Q96EY1 480 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 CYYR1Q96J86 154 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 OR5M11Q96RB7 305 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 TM2D1Q9BX74 207 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 XPO4Q9C0E2 1151 aaKnown RBP3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 TRPV6Q9H1D0 765 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 ARGLU1Q9NWB6 273 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 CYP39A1Q9NYL5 469 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 TMEM9Q9P0T7 183 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 PURGQ9UJV8 347 aaKnown RBP3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 ABCG2Q9UNQ0 655 aa3.06□□□□□ -1.92
HMGB1P49-201ENST00000418882 DHX29Q7Z478 1369 aaKnown RBP3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 A0A0U1RRA0 63 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 H3BMH7 237 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 PDLIM1O00151 329 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 HIST1H2AGP0C0S8 130 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 ZCCHC18P0CG32 403 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 ATP6V1B1P15313 513 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 ELK1P19419 428 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 CCZ1BP86790 482 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 CCZ1P86791 482 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 ACTN3Q08043 901 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 SMC1AQ14683 1233 aaKnown RBP3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 LIPKQ5VXJ0 399 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 SLC22A10Q63ZE4 541 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 PRR5LQ6MZQ0 368 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 TATDN1Q6P1N9 297 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 DLEU7Q6UYE1 221 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 CCDC91Q7Z6B0 441 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 ADGRD2Q7Z7M1 963 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 OR52J3Q8NH60 311 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 U2AF1L4Q8WU68 220 aaKnown RBP3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 DLX4Q92988 240 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 HIST1H2ACQ93077 130 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 CABS1Q96KC9 395 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 ZNF560Q96MR9 790 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 HCAR1Q9BXC0 346 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 MEPEQ9NQ76 525 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 KLRF1Q9NZS2 232 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 MBD2Q9UBB5 411 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 MTRRQ9UBK8 725 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 LHX3Q9UBR4 397 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 FAM153AQ9UHL3 310 aa3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 TRMT6Q9UJA5 497 aaKnown RBP3.05□□□□□ -1.92
HMGB1P49-201ENST00000418882 RAD54L2Q9Y4B4 1467 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 NPIPA5A0A0B4J1W7 369 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 A0A0J9YVX5 310 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 NPIPA5E9PKD4 350 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 ARPC1BO15143 372 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms