RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 KRCC1Q9NPI7 259 aaPredicted RBP11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 CNIH4Q9P003 139 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 LIPT1Q9Y234 373 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 LSM2Q9Y333 95 aaKnown RBP11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 EXOSC1Q9Y3B2 195 aaKnown RBP11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ATG4BQ9Y4P1 393 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 A0A1W2PP55 124 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 KAT7O95251 611 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ACP2P11117 423 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 IL7P13232 177 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ETV5P41161 510 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ETV1P50549 477 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TCEA2Q15560 299 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ZNF750Q32MQ0 723 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ZFP69Q49AA0 526 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 C3orf38Q5JPI3 329 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 PIP5KL1Q5T9C9 394 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TRIQKQ629K1 86 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 IL17RCQ8NAC3 791 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 PSD4Q8NDX1 1056 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ANKK1Q8NFD2 765 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 OR2L5Q8NG80 312 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TMEM163Q8TC26 289 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 SFXN5Q8TD22 340 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ZNF707Q96C28 371 aaPredicted RBP11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 MBNL1Q9NR56 388 aaKnown RBP11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 SNX7Q9UNH6 387 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 PCDHGA4Q9Y5G9 962 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 A0A1W2PPV9 198 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ASGR2P07307 311 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 SDC2P34741 201 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 BCL6P41182 706 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 MC3RP41968 323 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 PSPHP78330 225 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ABATP80404 500 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 NDUFA5Q16718 116 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ZNF793Q6ZN11 406 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 LHFPL3Q86UP9 236 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 NACC2Q96BF6 587 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 FAM46AQ96IP4 442 aaKnown RBP11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 PHOX2BQ99453 314 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 COMMD3Q9UBI1 195 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TRAPPC4Q9Y296 219 aa11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 MKI67P46013 3256 aaKnown RBP11.01□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 A0A087WUU8 490 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 A0A1W2PQ09 198 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 DUXAA6NLW8 204 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 AIFM1O95831 613 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ENDOUP21128 410 aaKnown RBP11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 PAICSP22234 425 aaKnown RBP11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 CERS1P27544 350 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TGM4P49221 684 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 HTRA3P83110 453 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 MAP4K2Q12851 820 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 IRF4Q15306 451 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 KIAA1161Q6NSJ0 714 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 CD300LDQ6UXZ3 194 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 SHFQ7M4L6 423 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 OR52E1Q8NGJ3 308 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 OR14C36Q8NHC7 312 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 FGF13Q92913 245 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 SLC25A46Q96AG3 418 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 PRR14Q9BWN1 585 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 C1QTNF7Q9BXJ2 289 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 BARHL1Q9BZE3 327 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 MARCH7Q9H992 704 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TBC1D17Q9HA65 648 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 MUTYHQ9UIF7 546 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 PCDHGB2Q9Y5G2 931 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 IQCMA0A1B0GVH7 501 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 A0A1W2PR48 441 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 PRAMEF27A3QJZ7 478 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 CHST10O43529 356 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ATP5A1P25705 553 aaKnown RBP11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 RGS1Q08116 209 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TMEM44Q2T9K0 475 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ABHD17CQ6PCB6 329 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 CLDN22Q8N7P3 220 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 IL17RDQ8NFM7 739 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 OR9A2Q8NGT5 310 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 OR2L8Q8NGY9 312 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 CREB3L4Q8TEY5 395 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 KAT2AQ92830 837 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 OSTF1Q92882 214 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 MS4A6EQ96DS6 147 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ZNF486Q96H40 463 aaPredicted RBP11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 SLC6A18Q96N87 628 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ASB16Q96NS5 453 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TM9SF2Q99805 663 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 CPEP16870 476 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 BTN3A2P78410 334 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 CHRNEQ04844 493 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TSPAN31Q12999 210 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 CKAP5Q14008 2032 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 PLK5Q496M5 336 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ZMAT1Q5H9K5 638 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ENTPD8Q5MY95 495 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 RNLSQ5VYX0 342 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 C18orf63Q68DL7 685 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 HSDL2Q6YN16 418 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms