RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 SLC9A6Q92581 669 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 SLC41A2Q96JW4 573 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 ALPK1Q96QP1 1244 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 PITX2Q99697 317 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 PELOQ9BRX2 385 aaKnown RBP15.7■□□□□ 0.1
SSBP3-205ENST00000417664 NMNAT1Q9HAN9 279 aaPredicted RBP15.7■□□□□ 0.1
SSBP3-205ENST00000417664 PAPOLBQ9NRJ5 636 aaKnown RBP15.7■□□□□ 0.1
SSBP3-205ENST00000417664 SLC13A4Q9UKG4 626 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 TMCC3Q9ULS5 477 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 MYOCOSA0A1B0GUC4 107 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 ZNF749O43361 778 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 MED26O95402 600 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 H1F0P07305 194 aaKnown RBP15.69■□□□□ 0.1
SSBP3-205ENST00000417664 GALNSP34059 522 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 MAP3K8P41279 467 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 IL1RL1Q01638 556 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 CHRNEQ04844 493 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 CSTF1Q05048 431 aaKnown RBP15.69■□□□□ 0.1
SSBP3-205ENST00000417664 STX4Q12846 297 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 SLC13A2Q13183 592 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 ZNF311Q5JNZ3 666 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 C6orf141Q5SZD1 244 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 YOD1Q5VVQ6 348 aaPredicted RBP15.69■□□□□ 0.1
SSBP3-205ENST00000417664 VWA5B2Q8N398 1253 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 PARP8Q8N3A8 854 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 SLC5A8Q8N695 610 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 OR52J3Q8NH60 311 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 OR4C6Q8NH72 309 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 HOXB13Q92826 284 aaPredicted RBP15.69■□□□□ 0.1
SSBP3-205ENST00000417664 MMABQ96EY8 250 aaPredicted RBP15.69■□□□□ 0.1
SSBP3-205ENST00000417664 OTUB1Q96FW1 271 aaPredicted RBP15.69■□□□□ 0.1
SSBP3-205ENST00000417664 RBM18Q96H35 190 aaKnown RBP15.69■□□□□ 0.1
SSBP3-205ENST00000417664 ZC3H10Q96K80 434 aaKnown RBP15.69■□□□□ 0.1
SSBP3-205ENST00000417664 RSPO3Q9BXY4 272 aaPredicted RBP15.69■□□□□ 0.1
SSBP3-205ENST00000417664 ADAP2Q9NPF8 381 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 POLE3Q9NRF9 147 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 PRTFDC1Q9NRG1 225 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 KLHL28Q9NXS3 571 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 HCN3Q9P1Z3 774 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 CDC14AQ9UNH5 594 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 ZNF232Q9UNY5 417 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 GMPPBQ9Y5P6 360 aa15.69■□□□□ 0.1
SSBP3-205ENST00000417664 TNRC6BQ9UPQ9 1833 aaKnown RBP15.68■□□□□ 0.1
SSBP3-205ENST00000417664 A0A1W2PRQ8 180 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 H3BMH7 237 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 FAAHO00519 579 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 FFAR1O14842 300 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 HRO43593 1189 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 PCDHGA12O60330 932 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 OR2B3O76000 313 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 GUSBP08236 651 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 CCDC159P0C7I6 412 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 ACP2P11117 423 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 CNR2P34972 360 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 NUP107P57740 925 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 GABARAPL2P60520 117 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 CXCR4P61073 352 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 DGCR6Q14129 220 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 SERTAD2Q14140 314 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 GANABQ14697 944 aaKnown RBP15.68■□□□□ 0.1
SSBP3-205ENST00000417664 NR0B2Q15466 257 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 DUSP5Q16690 384 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 MLIPQ5VWP3 458 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 BORAQ6PGQ7 559 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 GALNT12Q8IXK2 581 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 PEX5LQ8IYB4 626 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 FAM181AQ8N9Y4 354 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 SAP25Q8TEE9 199 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 CDS1Q92903 461 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 ZNF566Q969W8 418 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 PEX11GQ96HA9 241 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 HRASLS5Q96KN8 279 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 SPRTNQ9H040 489 aaPredicted RBP15.68■□□□□ 0.1
SSBP3-205ENST00000417664 CXorf21Q9HAI6 301 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 CUTCQ9NTM9 273 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 KLHL3Q9UH77 587 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 FBXO4Q9UKT5 387 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 WDR45Q9Y484 360 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 DNAH14Q0VDD8 3507 aa15.68■□□□□ 0.1
SSBP3-205ENST00000417664 STX11O75558 287 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 UGT2B17O75795 530 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 ADAP00813 363 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 THBS1P07996 1170 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 IFNA8P32881 189 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 POLR2IP36954 125 aaKnown RBP15.67■□□□□ 0.1
SSBP3-205ENST00000417664 ALDH3B2P48448 385 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 CLK3P49761 638 aaKnown RBP15.67■□□□□ 0.1
SSBP3-205ENST00000417664 PDX1P52945 283 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 CFHR1Q03591 330 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 CD47Q08722 323 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 DUSP8Q13202 625 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 RAPSNQ13702 412 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 LARS2Q15031 903 aaKnown RBP15.67■□□□□ 0.1
SSBP3-205ENST00000417664 AMZ1Q400G9 498 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 DCST1Q5T197 706 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 DEF8Q6ZN54 512 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 FRRS1Q6ZNA5 592 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 SATL1Q86VE3 508 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 GPR135Q8IZ08 494 aa15.67■□□□□ 0.1
SSBP3-205ENST00000417664 MAML2Q8IZL2 1156 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms