RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CEBPEQ15744 281 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 ERCC6LQ2NKX8 1250 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 ACSF3Q4G176 576 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 EIPR1Q53HC9 387 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 WIPI1Q5MNZ9 446 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 ZYG11AQ6WRX3 759 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 CDH24Q86UP0 819 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 LACC1Q8IV20 430 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 EIF1ADQ8N9N8 165 aaKnown RBP16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 ABTB1Q969K4 478 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 TMCO6Q96DC7 493 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 C11orf24Q96F05 449 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 LRRC46Q96FV0 321 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 KCNA7Q96RP8 456 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 UGT2B28Q9BY64 529 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 MID1IP1Q9NPA3 183 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 SLC35C2Q9NQQ7 365 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 EHD3Q9NZN3 535 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 KLRF1Q9NZS2 232 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 EXO1Q9UQ84 846 aaKnown RBP16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 CAMK2AQ9UQM7 478 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 CCDC168Q8NDH2 2452 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 CSMD1Q96PZ7 3565 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 A0A1W2PPM1 405 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 OR6C70A6NIJ9 312 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 G3V2L1 256 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 DVL2O14641 736 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 ABCB7O75027 752 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 UGT2B11O75310 529 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 REM1O75628 298 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 CBR3O75828 277 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 IL2RAP01589 272 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 ANXA4P09525 319 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 POU3F2P20265 443 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 MPIP34949 423 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 GCKP35557 465 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 PEX19P40855 299 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 PTGDSP41222 190 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 CCT5P48643 541 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 DLX5P56178 289 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 SPDYAQ5MJ70 313 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 DESI1Q6ICB0 168 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 SCIMPQ6UWF3 145 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 ARSKQ6UWY0 536 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 FAM83FQ8NEG4 500 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 OR9A2Q8NGT5 310 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 KAT2AQ92830 837 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 TMBIM1Q969X1 311 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 DTNBP1Q96EV8 351 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 WDYHV1Q96HA8 205 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 COL21A1Q96P44 957 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 BTBD9Q96Q07 612 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 PPCSQ9HAB8 311 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 EMCNQ9ULC0 261 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 GRID1Q9ULK0 1009 aa16.05■□□□□ 0.16
PDLIM2-208ENST00000416159 POLQO75417 2590 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 DCHS2Q6V1P9 2916 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 PRAMEF25A6NGN4 478 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 SYT5O00445 386 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 PLOD3O60568 738 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 ACTL6AO96019 429 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 C2orf80Q0P641 193 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 EFR3AQ14156 821 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 IMPG1Q17R60 797 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 CCDC153Q494R4 210 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 NSUN5P2Q63ZY6 315 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 SH2D5Q6ZV89 423 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 YRDCQ86U90 279 aaKnown RBP16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 FAM9CQ8IZT9 166 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 TNIP2Q8NFZ5 429 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 SLC35A4Q96G79 324 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 BBS4Q96RK4 519 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 EBPLQ9BY08 206 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 STMN4Q9H169 189 aaPredicted RBP16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 GALNT9Q9HCQ5 603 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 ZNF629Q9UEG4 869 aaPredicted RBP16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 WBP11Q9Y2W2 641 aaKnown RBP16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 L3MBTL1Q9Y468 752 aa16.04■□□□□ 0.16
PDLIM2-208ENST00000416159 C2orf72A6NCS6 295 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 CD8B2A6NJW9 211 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 UBFD1O14562 309 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 ERN1O75460 977 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 CRCPO75575 148 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 ZWINTO95229 277 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 PROCP04070 461 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 CT45A8P0DMV1 189 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 CT45A9P0DMV2 189 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 DDCP20711 480 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 CRHR1P34998 444 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 KRT20P35900 424 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 NAGLUP54802 743 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 FOXA1P55317 472 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 DNAJB13P59910 316 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 ZNF763Q0D2J5 394 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 CT45A2Q5DJT8 189 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 CFAP157Q5JU67 520 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 TMEM200AQ86VY9 491 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 TDRPQ86YL5 185 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 GSPT2Q8IYD1 628 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 WDSUB1Q8N9V3 476 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms