RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 MICU2Q8IYU8 434 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 ZNF321PQ8N8H1 164 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 SLC16A11Q8NCK7 471 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 APCDD1LQ8NCL9 501 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 C11orf65Q8NCR3 313 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 C17orf47Q8NEP4 570 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 OR8K3Q8NH51 312 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 M1APQ8TC57 530 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 ADAMTS17Q8TE56 1095 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 ASB9Q96DX5 294 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 SLC35A4Q96G79 324 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 VMP1Q96GC9 406 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 BTBD9Q96Q07 612 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 OR7D2Q96RA2 312 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 FOLH1BQ9HBA9 442 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 EQTNQ9NQ60 294 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 GMPR2Q9P2T1 348 aaKnown RBP13.24□□□□□ -0.29
SF3B1-204ENST00000414963 IL17BQ9UHF5 180 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 PACSIN3Q9UKS6 424 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 LIPT1Q9Y234 373 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 GPR55Q9Y2T6 319 aaPredicted RBP13.24□□□□□ -0.29
SF3B1-204ENST00000414963 PCDHGB3Q9Y5G1 929 aa13.24□□□□□ -0.29
SF3B1-204ENST00000414963 ANKRD65E5RJM6 399 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 ACOT8O14734 319 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 CREG1O75629 220 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 SEC24DO94855 1032 aaPredicted RBP13.23□□□□□ -0.29
SF3B1-204ENST00000414963 SORBS2O94875 1100 aaKnown RBP13.23□□□□□ -0.29
SF3B1-204ENST00000414963 GUSBP08236 651 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 ALOX5P09917 674 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 OR12D1P0DN82 309 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 ARAFP10398 606 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 ACP2P11117 423 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 LIFP15018 202 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 SPINK2P20155 84 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 DRD5P21918 477 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 PCGF2P35227 344 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 PPICP45877 212 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 CASP9P55211 416 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 DCAF7P61962 342 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 PSPHP78330 225 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 MS4A2Q01362 244 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 DUSP5Q16690 384 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 VMACQ2NL98 169 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 PLAG1Q6DJT9 500 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 IFNEQ86WN2 208 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 RAB43Q86YS6 212 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 ZSCAN1Q8NBB4 408 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 FAM156AQ8NDB6 213 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 ELP5Q8TE02 316 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 ADAMTS15Q8TE58 950 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 XAGE5Q8WWM1 108 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 FGF11Q92914 225 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 NCLNQ969V3 563 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 ADIPOR1Q96A54 375 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 YIPF4Q9BSR8 244 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 PIF1Q9H611 641 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 EXD2Q9NVH0 621 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 ACTR3BQ9P1U1 418 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 DKK4Q9UBT3 224 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 ZNF223Q9UK11 482 aaPredicted RBP13.23□□□□□ -0.29
SF3B1-204ENST00000414963 USP22Q9UPT9 525 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 POMPQ9Y244 141 aa13.23□□□□□ -0.29
SF3B1-204ENST00000414963 NME6O75414 186 aaPredicted RBP13.22□□□□□ -0.29
SF3B1-204ENST00000414963 AK1P00568 194 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 HPP00738 406 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 CT45A8P0DMV1 189 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 CT45A9P0DMV2 189 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 ICAM2P13598 275 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 GGT1P19440 569 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 TCN1P20061 433 aaPredicted RBP13.22□□□□□ -0.29
SF3B1-204ENST00000414963 OTX2P32243 289 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 GABRA3P34903 492 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 PSG6Q00889 435 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 ZNF155Q12901 538 aaPredicted RBP13.22□□□□□ -0.29
SF3B1-204ENST00000414963 CLN3Q13286 438 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 IL10RAQ13651 578 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 GNA13Q14344 377 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 EBPQ15125 230 aaKnown RBP13.22□□□□□ -0.29
SF3B1-204ENST00000414963 ZNHIT3Q15649 155 aaPredicted RBP13.22□□□□□ -0.29
SF3B1-204ENST00000414963 MAPK11Q15759 364 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 CT45A2Q5DJT8 189 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 ATAD3BQ5T9A4 648 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 PRAMEF8Q5VWM4 474 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 PRAMEF7Q5VXH5 474 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 HSDL2Q6YN16 418 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 MRGPREQ86SM8 312 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 PROSER1Q86XN7 944 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 C9orf40Q8IXQ3 194 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 ZNF441Q8N8Z8 693 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 CHDHQ8NE62 594 aaPredicted RBP13.22□□□□□ -0.29
SF3B1-204ENST00000414963 OR52E4Q8NGH9 312 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 OR5D16Q8NGK9 328 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 SLC38A5Q8WUX1 472 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 RAB8BQ92930 207 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 TP53INP1Q96A56 240 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 TRNT1Q96Q11 434 aaKnown RBP13.22□□□□□ -0.29
SF3B1-204ENST00000414963 BTBD2Q9BX70 525 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 GORASP2Q9H8Y8 452 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 MMP25Q9NPA2 562 aa13.22□□□□□ -0.29
SF3B1-204ENST00000414963 P2RX2Q9UBL9 471 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms