RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 NOP53Q9NZM5 478 aaKnown RBP5.88□□□□□ -1.47
USP54-202ENST00000413442 SLC17A7Q9P2U7 560 aa5.88□□□□□ -1.47
USP54-202ENST00000413442 HEY2Q9UBP5 337 aa5.88□□□□□ -1.47
USP54-202ENST00000413442 PLEKHB1Q9UF11 243 aaPredicted RBP5.88□□□□□ -1.47
USP54-202ENST00000413442 ATP6V1HQ9UI12 483 aa5.88□□□□□ -1.47
USP54-202ENST00000413442 CNOT11Q9UKZ1 510 aaKnown RBP5.88□□□□□ -1.47
USP54-202ENST00000413442 PCDHGB4Q9UN71 923 aa5.88□□□□□ -1.47
USP54-202ENST00000413442 ABCG2Q9UNQ0 655 aa5.88□□□□□ -1.47
USP54-202ENST00000413442 EXO1Q9UQ84 846 aaKnown RBP5.88□□□□□ -1.47
USP54-202ENST00000413442 MEMO1Q9Y316 297 aa5.88□□□□□ -1.47
USP54-202ENST00000413442 NINQ8N4C6 2090 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 RP1L1Q8IWN7 2480 aaPredicted RBP5.87□□□□□ -1.47
USP54-202ENST00000413442 TENM4Q6N022 2769 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 SMG1Q96Q15 3661 aaKnown RBP5.87□□□□□ -1.47
USP54-202ENST00000413442 TRGV5A0A0B4J1U4 118 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 A0A1B0GTH9 108 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 FOXO6A8MYZ6 492 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 PDPK1O15530 556 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 EMC8O43402 210 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 HS6ST1O60243 411 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 TSPAN2O60636 221 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 SPAG7O75391 227 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 REM1O75628 298 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 KCNH1O95259 989 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 PSMG1O95456 288 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 CBX7O95931 251 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 NGFRP08138 427 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 GUSBP08236 651 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 CT62P0C5K7 136 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 LINC00032P0C843 101 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 CT45A8P0DMV1 189 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 CT45A9P0DMV2 189 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 BCKDHAP12694 445 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 CPN1P15169 458 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 CHN1P15882 459 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 CHMP24386 653 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 MSX1P28360 303 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 HPCAL1P37235 193 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 SLC1A6P48664 564 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 PRIM2P49643 509 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 HTR6P50406 440 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 FOXA1P55317 472 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 CLDN8P56748 225 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 EEFSECP57772 596 aaKnown RBP5.87□□□□□ -1.47
USP54-202ENST00000413442 C17orf67Q0P5P2 114 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 TP53BP2Q13625 1128 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 GANABQ14697 944 aaKnown RBP5.87□□□□□ -1.47
USP54-202ENST00000413442 GXYLT1Q4G148 440 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 CT45A2Q5DJT8 189 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 SH2D4BQ5SQS7 431 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 BEND6Q5SZJ8 279 aaPredicted RBP5.87□□□□□ -1.47
USP54-202ENST00000413442 AGBL2Q5U5Z8 902 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 HHATQ5VTY9 493 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 C1QL3Q5VWW1 255 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 TIGD3Q6B0B8 471 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 OGFOD2Q6N063 350 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 FAM111BQ6SJ93 734 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 ENPP6Q6UWR7 440 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 TMEM64Q6YI46 380 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 TRILQ7L0X0 811 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 SPATA19Q7Z5L4 167 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 MRGPRGQ86SM5 289 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 MISPQ8IVT2 679 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 LIX1Q8N485 282 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 TMEM251Q8N6I4 163 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 ZNF321PQ8N8H1 164 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 FAM13CQ8NE31 585 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 OR52R1Q8NGF1 315 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 OR1J4Q8NGS1 313 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 PSMA8Q8TAA3 256 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 NEIL3Q8TAT5 605 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 OR5P2Q8WZ92 322 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 RND1Q92730 232 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 EXOSC8Q96B26 276 aaKnown RBP5.87□□□□□ -1.47
USP54-202ENST00000413442 VSTM2LQ96N03 204 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 ZFP3Q96NJ6 502 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 AMDHD1Q96NU7 426 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 KCNA7Q96RP8 456 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 DMRTA2Q96SC8 542 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 STACQ99469 402 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 LMF2Q9BU23 707 aaKnown RBP5.87□□□□□ -1.47
USP54-202ENST00000413442 G6PC3Q9BUM1 346 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 BHLHE41Q9C0J9 482 aaPredicted RBP5.87□□□□□ -1.47
USP54-202ENST00000413442 NXF5Q9H1B4 397 aaKnown RBP5.87□□□□□ -1.47
USP54-202ENST00000413442 TUBB1Q9H4B7 451 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 PTGES2Q9H7Z7 377 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 METTL7AQ9H8H3 244 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 NEUROD4Q9HD90 331 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 DEPPQ9NTK1 212 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 MRGBPQ9NV56 204 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 DDX18Q9NVP1 670 aaKnown RBP5.87□□□□□ -1.47
USP54-202ENST00000413442 TMEM45AQ9NWC5 275 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 NKIRAS1Q9NYS0 192 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 SH3BP4Q9P0V3 963 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 ZDHHC2Q9UIJ5 367 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 ACAD8Q9UKU7 415 aa5.87□□□□□ -1.47
USP54-202ENST00000413442 MYO7BQ6PIF6 2116 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 EXPH5Q8NEV8 1989 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 A0A1W2PRB8 838 aa5.86□□□□□ -1.47
USP54-202ENST00000413442 HRKO00198 91 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms