RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 XAGE5Q8WWM1 108 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 LINC00615Q96LM1 132 aaPredicted RBP16.6■□□□□ 0.25
SDCBP-202ENST00000413219 DCLRE1CQ96SD1 692 aaKnown RBP16.6■□□□□ 0.25
SDCBP-202ENST00000413219 JAM3Q9BX67 310 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 SLC28A3Q9HAS3 691 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 GALNT9Q9HCQ5 603 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 TMEM39AQ9NV64 488 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 TEKT2Q9UIF3 430 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 CBLCQ9ULV8 474 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 RTCAO00442 366 aaKnown RBP16.59■□□□□ 0.25
SDCBP-202ENST00000413219 IGHA1P01876 353 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 SLC6A1P30531 599 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 SOX18P35713 384 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 CD79BP40259 229 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 ANXA11P50995 505 aaKnown RBP16.59■□□□□ 0.25
SDCBP-202ENST00000413219 CDH11P55287 796 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 GNA13Q14344 377 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 FAM214AQ32MH5 1076 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 TRMT11Q7Z4G4 463 aaKnown RBP16.59■□□□□ 0.25
SDCBP-202ENST00000413219 LHFPL3Q86UP9 236 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 TRAPPC5Q8IUR0 188 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 TP53I13Q8NBR0 393 aaPredicted RBP16.59■□□□□ 0.25
SDCBP-202ENST00000413219 OR8D4Q8NGM9 314 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 EXOSC8Q96B26 276 aaKnown RBP16.59■□□□□ 0.25
SDCBP-202ENST00000413219 LRIG1Q96JA1 1093 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 F2RL3Q96RI0 385 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 TMED9Q9BVK6 235 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 PINK1Q9BXM7 581 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 HDHD5Q9BXW7 423 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 PIGUQ9H490 435 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 MED17Q9NVC6 651 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 IL36AQ9UHA7 158 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 ADAM29Q9UKF5 820 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 GPR52Q9Y2T5 361 aa16.59■□□□□ 0.25
SDCBP-202ENST00000413219 A0A087WUU8 490 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 SHISA3A0PJX4 238 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 PLOD3O60568 738 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 RFPL3O75679 317 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 HOXD11P31277 338 aaPredicted RBP16.58■□□□□ 0.25
SDCBP-202ENST00000413219 IFNA8P32881 189 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 EVI2BP34910 448 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 LSM11P83369 360 aaKnown RBP eCLIP16.58■□□□□ 0.25
SDCBP-202ENST00000413219 IKZF1Q13422 519 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 AADACL4Q5VUY2 407 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 TMEM107Q6UX40 140 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 NUDT13Q86X67 352 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 SLC39A11Q8N1S5 342 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 SUN3Q8TAQ9 357 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 RAD51AP1Q96B01 352 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 DTD2Q96FN9 168 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 ZNF514Q96K75 400 aaPredicted RBP16.58■□□□□ 0.25
SDCBP-202ENST00000413219 AIF1LQ9BQI0 150 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 ZDHHC5Q9C0B5 715 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 TBC1D17Q9HA65 648 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 LIPT1Q9Y234 373 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 CEP350Q5VT06 3117 aa16.58■□□□□ 0.25
SDCBP-202ENST00000413219 NUP210Q8TEM1 1887 aaPredicted RBP16.58■□□□□ 0.24
SDCBP-202ENST00000413219 LEUTXA8MZ59 168 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 NEDD8-MDP1E9PL57 170 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 NCR1O76036 304 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 CTSLP07711 333 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 CELP19835 753 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 KELP23276 732 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 AGFG1P52594 562 aaKnown RBP16.58■□□□□ 0.24
SDCBP-202ENST00000413219 CTBP2P56545 445 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 BDH1Q02338 343 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 PLA1AQ53H76 456 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 PRAMEF8Q5VWM4 474 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 PRAMEF7Q5VXH5 474 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 SHFQ7M4L6 423 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 C11orf74Q86VG3 221 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 C17orf64Q86WR6 236 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 COQ10AQ96MF6 247 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 GPR137Q96N19 417 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 ZNF558Q96NG5 402 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 NECTIN4Q96NY8 510 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 GFM1Q96RP9 751 aaKnown RBP16.58■□□□□ 0.24
SDCBP-202ENST00000413219 ZNF649Q9BS31 505 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 WACQ9BTA9 647 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 TEX12Q9BXU0 123 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 SMG9Q9H0W8 520 aaKnown RBP16.58■□□□□ 0.24
SDCBP-202ENST00000413219 OR2AG1Q9H205 316 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 ANKRD19PQ9H560 264 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 PTTG3PQ9NZH4 202 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 TRPC4Q9UBN4 977 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 DENND4CQ5VZ89 1909 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 TET1Q8NFU7 2136 aa16.58■□□□□ 0.24
SDCBP-202ENST00000413219 NINQ8N4C6 2090 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 A0A0G2JPF8 293 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 FAM170BA6NMN3 283 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 HNRNPCL2B2RXH8 293 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 HNRNPCL3B7ZW38 293 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 FGBP02675 491 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 HNRNPCL4P0DMR1 293 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 MTNR1BP49286 362 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 TRA2BP62995 288 aaKnown RBP16.57■□□□□ 0.24
SDCBP-202ENST00000413219 GPR176Q14439 515 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 EOGTQ5NDL2 527 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 ZBTB37Q5TC79 503 aa16.57■□□□□ 0.24
SDCBP-202ENST00000413219 AMIGO1Q86WK6 493 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms