RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 LIPMQ5VYY2 423 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 CAPN13Q6MZZ7 669 aaPredicted RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 SERPINA12Q8IW75 414 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 RDM1Q8NG50 284 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 FCRL1Q96LA6 429 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 SENP8Q96LD8 212 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 OR14A2Q96R54 314 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 RAD9AQ99638 391 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 C11orf84Q9BUA3 381 aaPredicted RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 ADAT1Q9BUB4 502 aaKnown RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 DCP1AQ9NPI6 582 aaPredicted RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 ACOT13Q9NPJ3 140 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 DZANK1Q9NVP4 752 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 SMPD4Q9NXE4 827 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 MRTO4Q9UKD2 239 aaKnown RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 TMEM184BQ9Y519 407 aaPredicted RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 A0A0G2JMZ2 1700 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 LRRC37A2A6NM11 1700 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 LRRC37AA6NMS7 1700 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 LTBP4Q8N2S1 1624 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 GLTPD2A6NH11 291 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 NPIPB9F8W1W9 429 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 GTPBP1O00178 669 aaKnown RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 SDHDO14521 159 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 THBS1P07996 1170 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 CSF3P09919 207 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 SLC35G4P0C7Q5 338 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 NQO2P16083 231 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 RCC1P18754 421 aaPredicted RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 CDK6Q00534 326 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 SLC25A11Q02978 314 aaKnown RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 NOGQ13253 232 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 GRB14Q14449 540 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 MED27Q6P2C8 311 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 TBPL2Q6SJ96 375 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 C3P1Q6ZMU1 363 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 CATSPERDQ86XM0 798 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 DENND1CQ8IV53 801 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 CPOQ8IVL8 374 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 MAML2Q8IZL2 1156 aaPredicted RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 OR4K15Q8NH41 348 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 BTN2A2Q8WVV5 523 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 HAS2Q92819 552 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 PYCR2Q96C36 320 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 SCMH1Q96GD3 660 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 ZFYVE21Q9BQ24 234 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 B3GNT5Q9BYG0 378 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 HDHD2Q9H0R4 259 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 XPNPEP3Q9NQH7 507 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 ZNF302Q9NR11 478 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 PDLIM7Q9NR12 457 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 PDP1Q9P0J1 537 aaPredicted RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 PHF11Q9UIL8 331 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 PIN4Q9Y237 131 aaKnown RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 TRAV19A0A0A6YYK7 116 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 C5orf51A6NDU8 294 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 ANXA2P2A6NMY6 339 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 NPIPA2E9PIF3 369 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 CLIC2O15247 247 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 GALR2O43603 387 aaPredicted RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 CYTIPO60759 359 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 PNPP00491 289 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 HPP00738 406 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 F10P00742 488 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 OR2T7P0C7T2 308 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 METTL15P1P0C7V9 234 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 IL1RNP18510 177 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 HTR1EP28566 365 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 GRK5P34947 590 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 CAMLGP49069 296 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 EEFSECP57772 596 aaKnown RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 NPRL3Q12980 569 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 DUOXA1Q1HG43 343 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 ISXQ2M1V0 245 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 TRIM60Q495X7 471 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 ARMC12Q5T9G4 340 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 OR6B2Q6IFH4 312 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 CYB5RLQ6IPT4 315 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 GDF6Q6KF10 455 aaPredicted RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 KLHL17Q6TDP4 642 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 AFTPHQ6ULP2 937 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 CYP2R1Q6VVX0 501 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 GDPD4Q6W3E5 623 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 ZNF620Q6ZNG0 422 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 IFNEQ86WN2 208 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 THNSL2Q86YJ6 484 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 SLC44A3Q8N4M1 653 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 DCBLD1Q8N8Z6 715 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 PLPP7Q8NBV4 271 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 TMEM104Q8NE00 496 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 FAM46DQ8NEK8 389 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 ZNF596Q8TC21 504 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 EMID1Q96A84 441 aaPredicted RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 MFSD3Q96ES6 412 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 RNF2Q99496 336 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 TEAD3Q99594 435 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 ITPAQ9BY32 194 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 PCBD2Q9H0N5 130 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 TSPAN10Q9H1Z9 355 aaPredicted RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 JPH1Q9HDC5 661 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms